Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0550 ATGTCTCTGAAGCCGTCCGATTCGACGGAGAGGCTGACACTGCCGGTTTCAAATCCTCCAAAGGATCAGGATGGAGGAAAGCCTTCCAAGGTCGACGAGAAGCTCTTCAATGGTTCTTCCATGACTAAACGAGGAGCCTACGCTGCAATCTCTTACATGTCCTGTGCGGTTCTCTTGGTGATGTTCAATAAGGCAGCTCTTTCATCTTATGACTTCCCGTCTGCAAATGTCATCACGCTTCTTCAGATGGTATGTTCTTGTTGTTTGCTCTATGTATTGAGGTGCTGGAGGTTAATTTCCTTCAGAGGAGGCGATTCTTTGATTTCTTCTGATAACTCAACAAGATTTGTGCCACTGAAGACTTTGAGGCACACTCTTCCTTTGGCAGGGACATATTTACTTTACATGATAGTTACCGTGGAGTCAGTTCGTGGAGTAAATGTTCCAATGTACACCACCCTTCGAAGAACCACAATAGTATTTACAATGCTGGTGGAGTATATGCTGGTGGGGCAGAGGTATGCATCCTCAGTTGTTTTCAGTGTTGGCCTGATTGTCATTGGTGCGTTTATTGCGGGAGCACGGGACTTCTCTTTTGATGCCTATAGCTATGCTGTTGTCTTTATGTCAAACATCACCACAGCTATATATCTCGCAACCATAGCCCGTGTTGGTTGAAAATCCAGTGGCCTTAATAGCTTTGGCCTTATGTGGTGCAATGGTATAATATGTGGACCAGTTTTGCTTATTTGGACATTAATTCGGGGTGACATGAAGATGACAATCAATTTTCCCTATCTGTTGTCACCTGGATTTATTGTTGTTTTGCTTTTTTCCTGCGTACTGGCTTTCTTCTTGAATTACAGTATTTTTCTGAACACAACTCTAAATTCAGCTCTGACACAAACAATTTGTGGTAATCTGAAGGATCTATTTACTATTGGCATTGGCTGGATACTTTTTGGTGGGCTACCATTTGATTTTTGGAATGTTGTTGGACAACTTCTCGGTTTTATTGGCTCTGGCTTATATGCCTACTACAAGCTGATTGGCAAATAA 1059 0.4259 MSLKPSDSTERLTLPVSNPPKDQDGGKPSKVDEKLFNGSSMTKRGAYAAISYMSCAVLLVMFNKAALSSYDFPSANVITLLQMVCSCCLLYVLRCWRLISFRGGDSLISSDNSTRFVPLKTLRHTLPLAGTYLLYMIVTVESVRGVNVPMYTTLRRTTIVFTMLVEYMLVGQRYASSVVFSVGLIVIGAFIAGARDFSFDAYSYAVVFMSNITTAIYLATIARVGXKSSGLNSFGLMWCNGIICGPVLLIWTLIRGDMKMTINFPYLLSPGFIVVLLFSCVLAFFLNYSIFLNTTLNSALTQTICGNLKDLFTIGIGWILFGGLPFDFWNVVGQLLGFIGSGLYAYYKLIGK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0550 352 PANTHER SOLUTE CARRIER FAMILY 35 47 348 - -
Dere04g0550 352 MobiDBLite consensus disorder prediction 1 35 - -
Dere04g0550 352 MobiDBLite consensus disorder prediction 1 16 - -
Dere04g0550 352 Pfam Triose-phosphate Transporter family 55 344 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0550 Dere-ChrDere04 5513535 5519044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0550 25 289 Organic Solute Cotransporters AT2G13650 25.641 7.02e-11 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1969 05 29592338 29597220 Dere04g0550 04 5513535 5519044 CCT
Dere04g0550 04 5513535 5519044 Dere04g0550 04 5513535 5519044 ECH