Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1742 ATGAAGGATGACGCAGCTGATCGAAAACAAGATAATCCATGGCCCTCATCAAGCTCGCCTCACGAGAAACCGGAAAAAGATGTGAAGCTTTGGGGAGTTTTCCTCTTCGGTTTGATTGGCGCCACCGCCACTACCTTCGCCGTTGGTCAGCTGCGGAGGACTGTTGATTTGTTCTGTGAACAGCTGTCCAGGTCGCAATCATCATGGAAAGGAGGGACAGGCAGTTCTTTCCGATCAGCTTTTCAGGAAGATGCATGGAAAAGGTACAATAAGCGGCTTCAAGAAGAGTATGAACAGGAGATGGAGAGAGTGGAACGTATAAGGCATATGCAAAGTGTGTTTAACAGGGAAAGGAACAAGTACAAAAGAAGCTATGAGAGCTGGAGGGAATATGGTCCCGGTGCCTATCATCAACATTTCCAGAGAGACGATTGGTATTGGAAGACTGATACATCCTACAGAAACTGGAGGACTAATTATCAGGAAGCTCCAGGAGAGATTGGAAGCTATTCATTATCCCATCACTACTCAGTTTTGGGTCTTGATAGGTTTAGAACAAAGCCATATACTGATGCAGAGATTAAGACAGCATTTAGGACCAAGGCAAAGGAGTATCATCCTGATCAGAACCAGGATAACAGAGAAGCTGCAGAGGCGAAATTCAAAGAGGTGATGAGTTCCTACGAGGCCATAAAACAAGAAAGAAAGAACCAGAAGCTGTTGCTATCTAGAGATGTGTTAAATATTATGCATGAAGGAAAACTGATAATGAATCATAGCGGCAGCGTGACCGGATTGGGTGAGATGATGTCATGCCACTTCGCTCCGGAGCTTCATAAAGACACTGATGACCTTGCTTTGGTAGCTTCGGCGGCGAAAAGTTCACCAGACGGCTAA 897 0.4548 MKDDAADRKQDNPWPSSSSPHEKPEKDVKLWGVFLFGLIGATATTFAVGQLRRTVDLFCEQLSRSQSSWKGGTGSSFRSAFQEDAWKRYNKRLQEEYEQEMERVERIRHMQSVFNRERNKYKRSYESWREYGPGAYHQHFQRDDWYWKTDTSYRNWRTNYQEAPGEIGSYSLSHHYSVLGLDRFRTKPYTDAEIKTAFRTKAKEYHPDQNQDNREAAEAKFKEVMSSYEAIKQERKNQKLLLSRDVLNIMHEGKLIMNHSGSVTGLGEMMSCHFAPELHKDTDDLALVASAAKSSPDG 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1742 298 Gene3D DnaJ domain 168 252 IPR036869 -
Dere05g1742 298 Pfam DnaJ domain 175 238 IPR001623 -
Dere05g1742 298 CDD DnaJ 175 229 IPR001623 -
Dere05g1742 298 ProSiteProfiles dnaJ domain profile. 174 251 IPR001623 -
Dere05g1742 298 Coils Coil 214 234 - -
Dere05g1742 298 PRINTS DnaJ domain signature 198 213 IPR001623 -
Dere05g1742 298 PRINTS DnaJ domain signature 216 236 IPR001623 -
Dere05g1742 298 SUPERFAMILY Chaperone J-domain 172 239 IPR036869 -
Dere05g1742 298 Coils Coil 90 110 - -
Dere05g1742 298 SMART dnaj_3 173 236 IPR001623 -
Dere05g1742 298 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 238 - -
Dere05g1742 298 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1742 Dere-ChrDere05 27145034 27149867 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1742 05 27145034 27149867 Dere04g0369 04 3795656 3798829 CCT
Dere05g1742 05 27145034 27149867 Dere05g1742 05 27145034 27149867 ECH