Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0369 ATGAAGGACGGCGCAGCTGATCGCGATCAAGATAATCCATGGCCCTCAACAAACGAACCCTATCAGGGAAAAGCCGAAGATATGAAGCTTTGGGGAGTTTTCCTCTTCGGCTTAATTGGTGCCACTGCCACTACCTTCGCCGTTGGTCAGCTGCGGAGGACTGTTGATTGGTTTTATACTCAGCTGTCCAGGTCACAGTCATCATGGAAAGGTGGGACTGGCAGTTCTTTTCGTTCAGCTTTTCAGGAAGAAGCATGGAAGAGATACAATAAACGATTGCAAGAGGAGTACGAGGAGGAGATGGAGAGAGTGGAACGTATAAGGCGTATGCAAAGTGTGTTTAACAGAGAAAGGAATAAGCACAAAAGAAGTTATGAAAGCTGGACGGAAAGTGGTCCTGGTACTTATCATCAACATTTCCAAAGAGATGATTGGTATTGGAAGGCAGACACATCCTTCAGAGATCGCAGGACTAATTATCGAGAAACTCCAAGGGAGAGTGGAAACTATTCATTATCACATCACTACTCAGTTTTGGGTCTGGACAGGTTTAGAACAGCACCATATACAGATGCTGAGATTAAGACAGCATTTCGATCCAAGGCAAAGGAGTATCATCCTGATCAGAACCAGGATAATAGAGAGGCTGCTGAGGCTAAGTTCAAAGAGGTTATGAGTTCCTATGAGGCGATAAAACAAGAAAGGAAGAACCAGAATCTGTGA 723 0.4467 MKDGAADRDQDNPWPSTNEPYQGKAEDMKLWGVFLFGLIGATATTFAVGQLRRTVDWFYTQLSRSQSSWKGGTGSSFRSAFQEEAWKRYNKRLQEEYEEEMERVERIRRMQSVFNRERNKHKRSYESWTESGPGTYHQHFQRDDWYWKADTSFRDRRTNYRETPRESGNYSLSHHYSVLGLDRFRTAPYTDAEIKTAFRSKAKEYHPDQNQDNREAAEAKFKEVMSSYEAIKQERKNQNL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0369 240 CDD DnaJ 175 229 IPR001623 -
Dere04g0369 240 ProSiteProfiles dnaJ domain profile. 174 236 IPR001623 -
Dere04g0369 240 SMART dnaj_3 173 236 IPR001623 -
Dere04g0369 240 MobiDBLite consensus disorder prediction 1 22 - -
Dere04g0369 240 Coils Coil 214 234 - -
Dere04g0369 240 MobiDBLite consensus disorder prediction 201 221 - -
Dere04g0369 240 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 238 - -
Dere04g0369 240 Pfam DnaJ domain 175 238 IPR001623 -
Dere04g0369 240 SUPERFAMILY Chaperone J-domain 173 238 IPR036869 -
Dere04g0369 240 Gene3D DnaJ domain 167 240 IPR036869 -
Dere04g0369 240 Coils Coil 83 110 - -
Dere04g0369 240 PRINTS DnaJ domain signature 198 213 IPR001623 -
Dere04g0369 240 PRINTS DnaJ domain signature 216 236 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0369 Dere-ChrDere04 3795656 3798829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0369 175 239 Miscellaneous Gene Families AT5G49580 40.000 4.66e-06 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1742 05 27145034 27149867 Dere04g0369 04 3795656 3798829 CCT
Dere04g0369 04 3795656 3798829 Dere04g0369 04 3795656 3798829 ECH