Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1662 ATGAAAAGATCAGAACACGTGACGAGAATACTTTGGAAGGCACAAGAGAAATGTCGTGTAGTCATGGATGACGTGGATGGGGGTTGGGATCTTGCAAGATTCTTGGCTCTGCCTCCGGCTATCGTGGGTGTTTGTGAAGGAGGGTGCTCAGTAGATGTGACGTCCACCAATCCACATGCAACCCTGCCCCCACACCCTCACCTCTTCCATCACCCTACACAGCTACGCCTCTCTTCCTTCTCATTTCTTTCTCCTCTTTTCAAACAACGCACTGGCTTTAAAAAGCAGTGGCACACAAGTCACGACCGAAGCGAAAATGTAAAGAAGGGAAGAGGTCTACCACACGATGATTCTGCTGCTTCATGTTTTGTCCTGCTCATGCACTACATGTGGCGCATACACACACAAACACTTCAAGAGCAGAGAGAAGAGGGAGACATGGGAGGTTGGGCTATAGCGGTGCATGGTGGCGCTGGTGTGGACCCAAATCTCCCGCCACAACGTCAGGAGGAAGCCAAGCAACTCCTCACACGCTGTCTCCATCTTGGCATCTCTGCTCTTCGTTCCAATCTTCCAGCCATCGATGTCGTCGAACTTGTCGTGAGGGAACTGGAAACAGATCCCCTGTTCAACTCTGGTCGTGGATCTGCTCTAACCAAAAATGGAACGGTGGAAATGGAGGCGAGCATCATGGACGGTCCAAAAAGAAGATGCGGTGCGGTATCGGGTGTGACCACGGTGAAAAACCCCATTTCACTGGCCCGGCTCGTAATGGAGAAGTCTCCTCATTCCTACCTCGCTTTCAACGGCGCTGAAGAATTCGCCAGGCAACAGGGCGTGGAGGTTGTGGACAACGAATACTTCATCACCCCTGAAAATGTCGGTATGCTGAAGCTGGCAAAGGAAGCCAATGCTATTCTGTTTGACTACAGGATCCCAACGGTAGGATACGAGACATGCGGAGCAGGAGTTGAGAGTCCACTGCAAATGAATGGGCTGCCAATCAGCGTATACGCACCCGAGACGGTAGGGTGCGTGGTGGTGGACGGCCAGGGACGGTGCGCTGCTGCCACGTCAACAGGGGGGCTCATGAACAAGATGACCGGAAGGATCGGTGACTCACCCTTGATCGGTGCTGGGACCTACGCCTGCGACTTGTGTGGGGTATCGTGCACGGGGGAGGGTGAGGCCATCATACGTGGCACGCTGGCGCGTGAGGTGGCGGCCGTCATGGAGTACAAAGGTGTGGGCCTGCAGGAGGCAGTGGACTTTGTGATAAAGGAGAGGCTGGACGAAGGGATGGCCGGGCTCATAGCGGTGTCCAATAGTGGAGAAGTGGCATATGGGTTCAACTGTAACGGCATGTTCAGGGGATGTGCCACGGAGGATGGGTTTATGGAGGTTGGAATCTGGGAATAA 1419 0.5377 MKRSEHVTRILWKAQEKCRVVMDDVDGGWDLARFLALPPAIVGVCEGGCSVDVTSTNPHATLPPHPHLFHHPTQLRLSSFSFLSPLFKQRTGFKKQWHTSHDRSENVKKGRGLPHDDSAASCFVLLMHYMWRIHTQTLQEQREEGDMGGWAIAVHGGAGVDPNLPPQRQEEAKQLLTRCLHLGISALRSNLPAIDVVELVVRELETDPLFNSGRGSALTKNGTVEMEASIMDGPKRRCGAVSGVTTVKNPISLARLVMEKSPHSYLAFNGAEEFARQQGVEVVDNEYFITPENVGMLKLAKEANAILFDYRIPTVGYETCGAGVESPLQMNGLPISVYAPETVGCVVVDGQGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACDLCGVSCTGEGEAIIRGTLAREVAAVMEYKGVGLQEAVDFVIKERLDEGMAGLIAVSNSGEVAYGFNCNGMFRGCATEDGFMEVGIWE 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1662 472 Pfam Asparaginase 150 471 IPR000246 GO:0016787
Dere05g1662 472 Gene3D (Glycosyl)asparaginase 342 472 - -
Dere05g1662 472 PANTHER L-ASPARAGINASE 150 458 IPR000246 GO:0016787
Dere05g1662 472 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 150 469 IPR029055 -
Dere05g1662 472 FunFam Isoaspartyl peptidase/L-asparaginase 342 472 - -
Dere05g1662 472 CDD Asparaginase_2 151 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1662 Dere-ChrDere05 26313396 26318198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1662 152 427 Miscellaneous Gene Families AT4G00590 27.517 1.22e-17 82.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1662 05 26313396 26318198 Dere04g0294 04 2981036 2986015 CCT
Dere05g1662 05 26313396 26318198 Dere05g1662 05 26313396 26318198 ECH