Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0294 ATGAATGGTTTGAAGTGGGTGAATGGCTTGCTGGTTATTTGTGGAGCTTATGCTCCCTTTCCAACCCGTGTCTCGCACCATAAACGCACCCCAACCCGTAACGCTACTACGGTAACTACAAAGGGAGAGGGAGATATGGGAGGTTGGGCTATAGCGGTGCACGGTGGCGCTGGTGTGGACCCTAATCTTCCACCCCACCGTCAAGAACAAGCCAAGCAACTTCTCACTCGCTGCCTCCATCTCGGCATCTCTGCTCTTGATTCCAATCTCCCCGCCATCGACGTCGTCGAACTTGTCGTGAGAGAGCTGGAAAGTGATCCACTGTTCAACTCAGGACGTGGATCTGCTCTGACAGAAAAAGGGACAGTGGAAATGGAGGCGAGCATCATGGATGGTATCAAAAGGAGATGCGGGGCCGTATCGGGCGTTACCACCGTCAAGAACCCGATATCACTGGCCCGATTAGTCATGGATAAATCTCCTCATTCCTACCTCGCTTTCTCCGGCGCCGAAGAATTCGCAAGGCAACAGGGCGTGGAAGTTGTGGACAACGATTACTTCATCACTCCTGAAAATGTTGGAATGCTGAAGCTGGCGAAGGAAGCGAACGCTATCTTGTTTGATTACAGGATCCCGATGGGAAGCGAAACGTGCGGCGCAGGAATAGAGAGCCCACTGCAAATGAATGGACTGCCAATCAGCGTATACGCGCCGGAGACGGTCGGGTGCGTGGTGGTGGACAGTGACGGACGGTGTGCAGCTGCCACGTCGACAGGGGGGCTGATGAACAAAATGACCGGAAGGATCGGGGACTCACCCTTGATCGGAGCGGGGACCTACGCGTGTGAGTTGTGCGGGGTGTCCTGCACGGGGGAGGGGGAGGCCATCATCCGGGGCACGCTGGCGCGTGAAGTGGCGGCGGTGATGGAGTACAAAGGCCTGCGGCTTCAGGAAGCAGTGGACTTCGTAATAAAGGAAAGGCTGGACGAAGGGATGGCTGGTTTGATAGCGGTGTCCAACACTGGGGAAGTGGCCTATGGCTTCAACTGTAATGGCATGTTCAGGGGTTGCGCAACCCAAGACGGCTTCATGGAAGTTGGAATCTGGGAATAG 1113 0.5526 MNGLKWVNGLLVICGAYAPFPTRVSHHKRTPTRNATTVTTKGEGDMGGWAIAVHGGAGVDPNLPPHRQEQAKQLLTRCLHLGISALDSNLPAIDVVELVVRELESDPLFNSGRGSALTEKGTVEMEASIMDGIKRRCGAVSGVTTVKNPISLARLVMDKSPHSYLAFSGAEEFARQQGVEVVDNDYFITPENVGMLKLAKEANAILFDYRIPMGSETCGAGIESPLQMNGLPISVYAPETVGCVVVDSDGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACELCGVSCTGEGEAIIRGTLAREVAAVMEYKGLRLQEAVDFVIKERLDEGMAGLIAVSNTGEVAYGFNCNGMFRGCATQDGFMEVGIWE 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0294 370 Pfam Asparaginase 49 369 IPR000246 GO:0016787
Dere04g0294 370 FunFam Isoaspartyl peptidase/L-asparaginase 240 370 - -
Dere04g0294 370 Gene3D (Glycosyl)asparaginase 240 370 - -
Dere04g0294 370 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 49 367 IPR029055 -
Dere04g0294 370 PANTHER L-ASPARAGINASE 49 356 IPR000246 GO:0016787
Dere04g0294 370 CDD Asparaginase_2 50 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0294 Dere-ChrDere04 2981036 2986015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0294 51 304 Miscellaneous Gene Families AT4G00590 30.108 3.52e-18 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1662 05 26313396 26318198 Dere04g0294 04 2981036 2986015 CCT
Dere04g0294 04 2981036 2986015 Dere04g0294 04 2981036 2986015 ECH