Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1584 ATGCAAGCGGTGGGGAGGCTTGGCAGCTACATTAGTCGGGGTGTATACACAGTGTCAGACTCCTTTCATCCATTTGGTGGCGCAGTGGATATTGTTTTAGTTCAACAACAAGATGGGAGCTTCAAGTCGTCGCCTTGGTACGTCCGATTTGGGAAATTCCAAGGGGTTTTAAAGGCAAAGGAGAAGGTGGTCAGCATTAATGTTAATGGAGTGGAAGCAAATTTCCATATGTATTTGGATAATAAAGGGCAAGCTTTTTTTCTCAGGGAGGTCGAAGTTGAAGAGGGGGAATCTATTATGTATCCATCATCTTCTGGAGATGAGAGAGATATTCAGGATAAGAAGCACCATTTGATGCCCAAAAGCTTTAGTTTTGATTCAGAGAAGTCAAACTCTATGGCTCAGGTTGATATAAACAAAGGTAACGTTCTAGCCAGGACTAATTCTGACGGATCAATGATAAATGGGCTAGTCATTGGGGATAATAATTTTCAGCGGGAGGTCCACAATGCTGGTATACGTAGATTAGGTTCGTTGGAGTGTGCTGAGATTGCAGCCAACTTGTTGGAGGTAAAGTGGTCTACCAACCTTGCTGGTCATAAACCACCTCGTAAAGATCGTCCAAAAACTCGAAAGAGCAAATCTCAGCATGACAACACGGAGAATTCTTCAAACCAGCGTAAATTATATGAGAAAGCTTATTCCCGTAATGAGCAAGAAGGCCTCTATTCCAACTCTGACCTTGAAGTTGCCCGAGGACTCAGTGAGGATACGGGTGTATGCTCATCATGTTTAAGCACCGCAGATGAAGTTAGCTTTACAAAGCAGAAAGTCGAGGTGATAACTGAAGTATCAATGAGTATTGGTACTGCAGAGGACACTGAACATGACACGAAGGTGAAGGAAGTTATATCCGATGGAACCAGGTGTGATTTGGAAGTTGCTTGTCAAGAAATTAAAGCAAGCAATGAAAAAAGGCAGCCGAGTGGAGAAGATGTTTCTGGTGTAAGCATTATGCCAGGTAATGGAATTGCAGAGGAGGATATTTCACCAAATGGAGTTCAGTTACTAGTTTATAGGGAAACGCCAGAGAGTTTGATTGGACGTGTGGACTATTCCAGTCAATGTAATCATGACGTGCTGTACCCTGCTAATAAAACATTTGGACCAGTACATGCTCATGCAGAGGCTTTACAAGCGACAACGTCAATGCTACCTGAGGTTACAAAAACTGAGGAAGTCACAATGAATGCTGAAGTGGGGGTGCCAGTAATGGAGGTTTGCCAGACTTCTCAGCAAACAAATTATCCTCATCCTGGTGTCAGTAATGTGGCAAATATTGAAGACCAAACAACATTACCTCGAACAGTCAATCTTGATCTAGGACTTTGTTCAGCTGAGAAGGATGAGTCAAACTGTATTGCCAAAACTTCTTCCTACAGCAGCCTAGGTGACCGAGCCTTAGAAGAGAAAATATCGAGGGTTGAAGATGTTTCAAGCACATTAACATCTCCTCTGCCTCCTGGTGATTGTGTCCTTGGAAAATCAAGCAGACCACCATCTCCAAGTTCAGAGGAAAAGCTCTTTCTTTCTAGTGACCTTGATGACTCCACATTCAAGGATCAATTTGAGGGATCAAACTCCTCTGAATATGTATACAAGGAAGATAAACATTCTTACAGTTTTCATTTATCTCCAGAAAGTCAAATGACTGATCTTGAAAAGATGAGTGTAACATCCAGTCACACAGTTATCCCTAAAAATAAGGTTGCTGGGGAGGAAGACAGGCAGCTGACAAATTCATTGCCCAGTAGTATGCATTCTCATAGTAATACTCTGGATCAGCATGATCTGTGTTATCCATTGAATCATTTACAGGACTCAAGGTCCCCTATCTTGGAGCAGCCATTGCTTGGGAAAGATGACTTAAAATGTCTAAAACCAGATGACCAATTATTACCCGAGGAGCCAGTTGTGAGGGACAACAATAGTTCAGGAGATGCTAAGAGTACTGCTATGAATCCTCCATTTGGTGACTCATCAGCACCCGCCCCTTCCCCCAGTGGAAACTGGAGGCTTTGGCCCTTCTCCTTCAGGAGATCAAGTCCTGAAACAGTTATTGTCCCTGCTCTTGATGCAAAGGACACAAATGCTTCAGAGAGTTCAGTCAACACTGACGCAGACAAAAATGAGCTCAAACCCAAGCTATTGAAAAGGAACATTAGGGCGAACACTCCAACATCTGAACAGCTGGCATCCTTGAATCTAAAGGAAGGAAGGAATATTGTAATCTTCACTTTCTCTACTGCTATGCTCGGGTGTCAACAGGTTGATGCCCAAATATATTTATGGAAATGGAACACTCGTATAGTGATCTCAGATGTGGATGGAACAATTACGAAGTCAGACGTTCTAGGTCAGGTAATGCCTTTGGTTGGAGTGGACTGGTCACAGACAGGTGTTACGCATTTATTCTCAGCTATCAAGGAAAATGGTTATGAACTGCTTTTTCTCAGTGCTCGTGCAATTTCTCAGGCCTATCGCACCAGACAATTCCTAGGTAACCTTAAGCAGGATGGGAAAGTTTTACCCGGTGGTCCTGTAGTTATTTCTCCTGACGGGCTTTTTCCCTCTTTATTTCGAGAAGTTATCAGGAGGGCCCCTCATGAGTTCAAAATTGCATGTCTGGAGGATATCAAAGCACTTTTTCCTCCTGACTGCAATCCATTTTATGCTGGATTTGGAAATAGAGATACCGATGAGATCAGCTACCTCAAGGTTGGAATCCCCAAAGGGAAAATCTTCATTATTAATCCCAAGGGAGAGGTTGTCGTGAACCACCGACATGACACAAAATCATATACATCACTTCATGCTCTGGTGAATGGGATGTTCCCTCCTACGAACTCATTTGAGCAGGAGGATTTTAATTCATGGAATTACTGGAAGATACCTCCTCCTCTTATAGGCAATTGA 2976 0.4294 MQAVGRLGSYISRGVYTVSDSFHPFGGAVDIVLVQQQDGSFKSSPWYVRFGKFQGVLKAKEKVVSINVNGVEANFHMYLDNKGQAFFLREVEVEEGESIMYPSSSGDERDIQDKKHHLMPKSFSFDSEKSNSMAQVDINKGNVLARTNSDGSMINGLVIGDNNFQREVHNAGIRRLGSLECAEIAANLLEVKWSTNLAGHKPPRKDRPKTRKSKSQHDNTENSSNQRKLYEKAYSRNEQEGLYSNSDLEVARGLSEDTGVCSSCLSTADEVSFTKQKVEVITEVSMSIGTAEDTEHDTKVKEVISDGTRCDLEVACQEIKASNEKRQPSGEDVSGVSIMPGNGIAEEDISPNGVQLLVYRETPESLIGRVDYSSQCNHDVLYPANKTFGPVHAHAEALQATTSMLPEVTKTEEVTMNAEVGVPVMEVCQTSQQTNYPHPGVSNVANIEDQTTLPRTVNLDLGLCSAEKDESNCIAKTSSYSSLGDRALEEKISRVEDVSSTLTSPLPPGDCVLGKSSRPPSPSSEEKLFLSSDLDDSTFKDQFEGSNSSEYVYKEDKHSYSFHLSPESQMTDLEKMSVTSSHTVIPKNKVAGEEDRQLTNSLPSSMHSHSNTLDQHDLCYPLNHLQDSRSPILEQPLLGKDDLKCLKPDDQLLPEEPVVRDNNSSGDAKSTAMNPPFGDSSAPAPSPSGNWRLWPFSFRRSSPETVIVPALDAKDTNASESSVNTDADKNELKPKLLKRNIRANTPTSEQLASLNLKEGRNIVIFTFSTAMLGCQQVDAQIYLWKWNTRIVISDVDGTITKSDVLGQVMPLVGVDWSQTGVTHLFSAIKENGYELLFLSARAISQAYRTRQFLGNLKQDGKVLPGGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKALFPPDCNPFYAGFGNRDTDEISYLKVGIPKGKIFIINPKGEVVVNHRHDTKSYTSLHALVNGMFPPTNSFEQEDFNSWNYWKIPPPLIGN 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1584 991 MobiDBLite consensus disorder prediction 663 686 - -
Dere05g1584 991 PANTHER LIPIN 1 989 IPR026058 -
Dere05g1584 991 SMART lns2 790 946 IPR031315 -
Dere05g1584 991 Pfam LNS2 (Lipin/Ned1/Smp2) 745 966 IPR013209 -
Dere05g1584 991 Pfam lipin, N-terminal conserved region 1 96 IPR007651 -
Dere05g1584 991 SUPERFAMILY HAD-like 782 932 IPR036412 -
Dere05g1584 991 MobiDBLite consensus disorder prediction 648 686 - -
Dere05g1584 991 MobiDBLite consensus disorder prediction 197 228 - -
Dere05g1584 991 MobiDBLite consensus disorder prediction 499 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1584 Dere-ChrDere05 25449474 25455951 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1584 05 25449474 25455951 Dere04g0252 04 2562156 2568352 CCT
Dere05g1584 05 25449474 25455951 Dere05g1584 05 25449474 25455951 ECH