Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0252 ATGGAGAGGCTGGGCAACTGCATCAGTCGGGGCGTGTGCACTGTTTCGGGCCCCTTTCATCCTTTTGGTGGCGCTGTGGATATTGTTGTAGTTGAGCAGCAAGATGGGAGCTTCAAATCGTCGCCTTGGTACGTTCGATTTGGGAAATTTCAAGGGGTTTTAAGGGCAAAGGAGAACGTGGTCAACATTAGCGTTAATGGTGCAGAAGCTGATTTTCATATGTATTTGGATCATAAAGGGGAAGCATTCTTTCTTAGGGAGGTGGATGCCGAAGATGGAGAATCTGTCATGTATACATCATCTTCTAGCGATGAGACAGATAACCGACCTCAGGATAATAAGCGCCCTTTGAGATCCAAAGGTTTTGATTTCGATTCTGGCATGTCAAATTCAGTTGCTCAGATTGACGTAAGTAACAGTAAGATATTGGCCAGGACTAATTCTCGACGATCACGGATACTTGGTTTTGTATTTGGTCGAAGGTCGATGAAGGGCAATAATAGTGTTGAGGGGGGAGTTGAGGACCATGGTATGAACAGGAGAGATTCATTGGAGCGTGCCGAGATTGCAGCTAATCTGTTGGAGGTAAAGTGGTCTACCAATCTTGCAGATGATAAACCACCTCGCAAAAACAACATAAAAACTTGGCGAAGTTCTCCTCGCCAAGATAACATGGAGAATGGTTTGGATCAACGTAAATTGAACGAAGAGGCTTGTTCCTACTCTAAGCAAGAAGACATCAGTTGTTCTTCCAAGTCAGAATTAGAAGGAATTGGCGAGGATGAGGGTTTAAACCTTTCATGTTTAAGCACCCAGGACAAAGGTAACACAAACGTCAAGGAAGTTGTATATGATAGCACCAGGACTGATTTACAAGTTGCATGCGTAGAGCTTGAAACGCACATTGAAAAGCAATTGAATCGAGAAGAGGTATCTGGAGTTACCACTGTCGATTTGCCAGTTTATGGAATTTCTGAGGAGGAATTTTTGGCAAATGGAGGTCAGTCTCTTGTTTATTGCAAAACGTCAGAGACCTCAATGGTGGGCATGGATTGTTCCAGTGAACAAACTCATGAGCTCTTGTACCTTGCTAGCGGAGGATGTCAACAAGTCCATGTGCATGCTGAAATCTTACATGCAACAACTGTACTGCTTCCTGAGGTCCCAAGTACTAAGGATGACACTAAAAATATTGATCTCAGGGTGCCAGTGGAGGTTTCTGAGTTTCATTCTCAGGAAACAGATTGTTCTCATTTTGGTGTTAGTAATTATGATATGGTGGATGCTAAAGACCCATCAACATTGCCATATCCTCAAACAGTCAACTTGGATCCAGGACTTTGTTCGCTTGAGCAGGTTCAGACAAATTGTGTAGCCGCAAGTTCCTGTTACAGCAGCCTGGATAACCAAGTCTTAGATGAGAATAGCATGAAAGAAAATGATGTTTCAAGTGTGTTCTCATCCCCCCTGGTTCCTGTTGGTGATTGTGTCCTTATTAAAGCATCAAGTAGACCTTCACCAGCCATTTCAAATGAAGAAGTTATTCATTCCAGTGATATTGATGAATGCCGAGTTATTGATCAGTGTGAAGGGTCAATCTCCCCTGATTTTGTGGTCAGAGAAGATCATTTTTCTTTTGTGGATAGCATTGAACAAGTGAGCCAGTTAGTTGACACAAATTACAATCCACGATCATCTCCAGAAAGCTTTATCACCAAAAGTCAAATGGATGACCTTCAAAAGTTCAGACGAACAAGCAGACCCATAAGTATACCTAGAAATAAGGTTGCCAGGGAGGAAGATGGACTGCTGTCAAGATCCTTGCCCAATATGTCTTCTCATAGTGACATTCTCAGTAAACATGATGTCTGTTATCCTTTAAGTCAATCACTGGACTCAAACTCCAAATTATTGAAGTATACATTTCCTGGCAAAGATTACTCAAAATGTCTAAATTCAGATGTAGACAAAGAAAACCAGTTGTTACATGAGGAGCCAGGTGACAAGGATAACCATAGTTCGAGGGAATTCAAGAGTACTGTATTGAATACTCCTATTGGAGACCTATCTGGATTCAACCCTCCTCCTGGTGGAAACTGGCGACTTTGGCCTTTCTCCTTCAGGAGATCAAGATCTGGAAAGGCTATGCTTCCTGCTCCAAGTGATGCCAAAAATGCTACTTCTGGTAGTGCTTCGGAGAGTGCAATGAGTACTGATGCTGACAAAAATGAGCTCAAGCCCACTCCAACAAGAAAGAAGGTTAGGGCAAAGACTCCAACATCTGAACAGCTGGCCTCCTTAAATCTTAAGGAAGGGAGGAACATAGTAACTTTCACCTTCTCTACTGCTATGCTGGGGGAGCAGCAGGTTGATGCTCAGATATATTTGTGGAAATGGAACACCCGTATAGTGATCTCAGATGTGGATGGAACAATTACAAGGTCAGATGTTCTAGGACAGTTCATGCCTTTGGTTGGAGTAGACTGGTCACAGACAGGGGTTGCACATTTATTCTCAGCTATCAAGGAAAATGGTTACCAACTGGTTTTCCTTAGTGCTCGTTCAATTTCTCAGGCCTATCATACGAGACGATTCCTATTCAACCTTAAGCAGAATGGGAAAGTCTTACCAGATGGTCCTGTTCTTATTTCGCCTGATGGACTTTTTCCCTCCCTATATCGTGAAGTTATCAGGAGGGCTCCTCACGAATTCAAAATTGCATGCTTGGAGGACATCAGGGCACTTTTTCCTTCCGATTGCAATCCATTTTATGCTGGTTTTGGCAACAGGGATACTGATGAAATCAGCTACCTTAAGGTTGGAATACCAAAAGGAAAAATCTTCATTATTAATCCAAAGGGAGAGGTTGCTGTAAACCGATGTGTTGATACAAAGTCATATGCTTCTCTTCATGCTCTCGTACATGGAATGTTCCCCTATATGAACTCATCTGAGCAGGAGGCCTACAACTCGTGGAATTTCTGGAAGCTACCTCCTATTGATACTTGA 3009 0.4274 MERLGNCISRGVCTVSGPFHPFGGAVDIVVVEQQDGSFKSSPWYVRFGKFQGVLRAKENVVNISVNGAEADFHMYLDHKGEAFFLREVDAEDGESVMYTSSSSDETDNRPQDNKRPLRSKGFDFDSGMSNSVAQIDVSNSKILARTNSRRSRILGFVFGRRSMKGNNSVEGGVEDHGMNRRDSLERAEIAANLLEVKWSTNLADDKPPRKNNIKTWRSSPRQDNMENGLDQRKLNEEACSYSKQEDISCSSKSELEGIGEDEGLNLSCLSTQDKGNTNVKEVVYDSTRTDLQVACVELETHIEKQLNREEVSGVTTVDLPVYGISEEEFLANGGQSLVYCKTSETSMVGMDCSSEQTHELLYLASGGCQQVHVHAEILHATTVLLPEVPSTKDDTKNIDLRVPVEVSEFHSQETDCSHFGVSNYDMVDAKDPSTLPYPQTVNLDPGLCSLEQVQTNCVAASSCYSSLDNQVLDENSMKENDVSSVFSSPLVPVGDCVLIKASSRPSPAISNEEVIHSSDIDECRVIDQCEGSISPDFVVREDHFSFVDSIEQVSQLVDTNYNPRSSPESFITKSQMDDLQKFRRTSRPISIPRNKVAREEDGLLSRSLPNMSSHSDILSKHDVCYPLSQSLDSNSKLLKYTFPGKDYSKCLNSDVDKENQLLHEEPGDKDNHSSREFKSTVLNTPIGDLSGFNPPPGGNWRLWPFSFRRSRSGKAMLPAPSDAKNATSGSASESAMSTDADKNELKPTPTRKKVRAKTPTSEQLASLNLKEGRNIVTFTFSTAMLGEQQVDAQIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLVFLSARSISQAYHTRRFLFNLKQNGKVLPDGPVLISPDGLFPSLYREVIRRAPHEFKIACLEDIRALFPSDCNPFYAGFGNRDTDEISYLKVGIPKGKIFIINPKGEVAVNRCVDTKSYASLHALVHGMFPYMNSSEQEAYNSWNFWKLPPIDT 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0252 1002 MobiDBLite consensus disorder prediction 723 743 - -
Dere04g0252 1002 SUPERFAMILY HAD-like 795 945 IPR036412 -
Dere04g0252 1002 Pfam LNS2 (Lipin/Ned1/Smp2) 758 979 IPR013209 -
Dere04g0252 1002 PANTHER LIPIN 2 1001 IPR026058 -
Dere04g0252 1002 SMART lns2 803 959 IPR031315 -
Dere04g0252 1002 MobiDBLite consensus disorder prediction 107 121 - -
Dere04g0252 1002 MobiDBLite consensus disorder prediction 95 125 - -
Dere04g0252 1002 MobiDBLite consensus disorder prediction 202 230 - -
Dere04g0252 1002 MobiDBLite consensus disorder prediction 744 758 - -
Dere04g0252 1002 Pfam lipin, N-terminal conserved region 11 96 IPR007651 -
Dere04g0252 1002 MobiDBLite consensus disorder prediction 714 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0252 Dere-ChrDere04 2562156 2568352 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1584 05 25449474 25455951 Dere04g0252 04 2562156 2568352 CCT
Dere04g0252 04 2562156 2568352 Dere04g0252 04 2562156 2568352 ECH