Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1352 ATGGAGGCGCCCTCCTTTGTCTCCAAAGCGAGGACTGCCTTCCATTCTGCGGCTGCGAAAGCGGAGCGTGTTCTCTTGGACTTCAAATCTGATCGAGATCCTGATAAACAATCACCCGACAATTTGACAAGGCAAGGAAAAGATGAATCTCCTCGGAACGAGGGCGAGTCCAAGCTTTGCAGTGATTTGAAAAAGTGGAGACCTCCACATATACCTATAAAGCAGGATTGGCAAGATAGAATAAAGAATATTCGGATAGGAAGAAAAGAGGTCGAAGAAACAGATAAAGTTGGTGATGCAACCATGGCTTTTCCATTTTATGATGAAAATCTGTACATCCTGAATATGAAAAATGATCTTGAGACCAAGGTTTCTGAAGCAGTACCCACGGTTGAAGGCATAACTGCCACAGCTAGAGATCCCATTCCTCCATCATCTGTGCTGAGGCAGTTGGCTATAGCTATTGAGGCTGGAAGGAAACCAAGGTCAGTTAAAGATTTTGTAGCTTCATCAGCAAATTCTTCTCCTGGCAAAGACAGGGCAGGCTTAAGTCTCCAAGCAGTGAAGGCTTTAGTGTTGCGTGAAAGAGACGACAAACTTGCCATTGAGTTTAGTAAAGATGAGAAAGTTGGTTTTTTAATTAATTCTCTGTTTGATCCAGAGGGAGAATTCCTTAGAAGGAAGATCAACTCTACTTCAGAGGAAACTTGCACAACATCTTTGCTAAGAGATATTCATGGTGCCCCTCCTGAAAGCATTGTCGTTAAGATAGCTGAAATCATTGGGAACTTCAGAAGCCTTCGAAAAATGGCTTTGTTTTGGTGCAGGGTTGTTGTTGAACTGAAAAAACTTTGGTCTGAGGAGCAACATATACCTGGAGTACCCCCTGATGACATTCCAGATCTTAAGTCATGTCTTCTGTATCAACAATTTCAAGTAATTAATTGTTGTATCTCTCGGAAAAGGCGCCGTTATATTGCCACTGAATCTCTGGATTCTTTGATGGAAGGCAGTTCAATTATTAAAGAATCAACTCACCATTGTAATGGCATCCCTGAAAGCCCTGTTCTATATGCTAGATTAAGCACTGGGGAGCTTGTTCTTCGACTTGGTGCTGATCACCCATCTGGGGATTTGACATTGTTAGAAACTGGCGAGCCTGTGTACTCTCCAATCATGCAGGAAGGACCTTTGCTTACAGAAGATCTGATCAAAGAAACAGAAGAATTTGTTCTGCGGACTGGAAGTGTTGGTGCCGGGTGCTCTCAACTCCTCTCTGATATGCAGGCTTTCAAGGCTGCCAACCCTGGTTGTATTTTAGAAGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGAATGTGAACAAAGTACTGAGGCTAAGGATTCCTCTGATGGTGGTGACTCTGGTGAGTCGTTGTCCACCAGAGGACAGCTAAGTCGGCGAATGCAAAAAGAAGGTAATTTGTGGCGAGAACTGTGGGAAACATCAAAACCAGTACCAGCTGTTAAACAGACACCTCTCTTTGATGAGGACTTAGCAGTGGAGGGCATCCTAGATGCTTTTGAGGACATCCAGCCCTCTGAACTTTTTGAGCAATTGTTTGTTTCTTTACTTGGTTTAGGATTTGCAATGGCTGAGCCTATGCTGTTTGGTAGCAGTGACTTCTCAAAGTTGTTCTATGACTGCAAAGATTACATAGTTGTCACTTGTCAAAGCAGCAGTTGGAGGGAGAAAATTGATGAACTTTGCCAGGTATATGAAACAGTGGAAACAGTGTTAACAAATCCTGAGGAAGCGCTAAAGATGATCAAGCAGGCAGAAGAATCATCTACAACAACCGGTGAACCAAAGCGTCTGTTTAGAAGGCTCAGCCTTATCTTTGGTGGCAAAGATAAACCAGTGAGAAAACCCGTTTCCGAAGAGCTGATAGATTCTGATGGCAACCCAATTCGGCAATCCTTTTCAAGTTTCTTTGACAACAAGTCATCTGTATTTGCAAAGAAGCCTTCCAAGTCTGAAGGCGCTTCCCCTGCAAGAAAACCTCACTGTCCCGGAAGTGATTGGACAGTTGTTTCGCCTAAGTTCTTGTGA 2097 0.4344 MEAPSFVSKARTAFHSAAAKAERVLLDFKSDRDPDKQSPDNLTRQGKDESPRNEGESKLCSDLKKWRPPHIPIKQDWQDRIKNIRIGRKEVEETDKVGDATMAFPFYDENLYILNMKNDLETKVSEAVPTVEGITATARDPIPPSSVLRQLAIAIEAGRKPRSVKDFVASSANSSPGKDRAGLSLQAVKALVLRERDDKLAIEFSKDEKVGFLINSLFDPEGEFLRRKINSTSEETCTTSLLRDIHGAPPESIVVKIAEIIGNFRSLRKMALFWCRVVVELKKLWSEEQHIPGVPPDDIPDLKSCLLYQQFQVINCCISRKRRRYIATESLDSLMEGSSIIKESTHHCNGIPESPVLYARLSTGELVLRLGADHPSGDLTLLETGEPVYSPIMQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTECEQSTEAKDSSDGGDSGESLSTRGQLSRRMQKEGNLWRELWETSKPVPAVKQTPLFDEDLAVEGILDAFEDIQPSELFEQLFVSLLGLGFAMAEPMLFGSSDFSKLFYDCKDYIVVTCQSSSWREKIDELCQVYETVETVLTNPEEALKMIKQAEESSTTTGEPKRLFRRLSLIFGGKDKPVRKPVSEELIDSDGNPIRQSFSSFFDNKSSVFAKKPSKSEGASPARKPHCPGSDWTVVSPKFL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1352 698 MobiDBLite consensus disorder prediction 451 483 - -
Dere05g1352 698 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 83 692 IPR045700 GO:0005096|GO:0043547
Dere05g1352 698 MobiDBLite consensus disorder prediction 25 62 - -
Dere05g1352 698 MobiDBLite consensus disorder prediction 468 483 - -
Dere05g1352 698 MobiDBLite consensus disorder prediction 667 698 - -
Dere05g1352 698 Pfam Rab3 GTPase-activating protein catalytic subunit 369 524 IPR026147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1352 Dere-ChrDere05 22158444 22168452 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1571 04 17447031 17457131 Dere05g1352 05 22158444 22168452 CCT
Dere05g1352 05 22158444 22168452 Dere05g1352 05 22158444 22168452 ECH