Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1571 ATGATCTCCGCCAGTCTCTCTTTGCGACAGTTTTCTCCGTTGGTACAATCGTCAGCATCAGTACCTGGTCGTCTTCTTCCTCTCTCTCTCTCTCTCTCTCGCGGACGCGTTCTTTCTCTTTCGCACTACAAATACAGCACCAGAGAATATTTGAGTAAGCTTCAACCTGCGCATCAGAAGCGTAGGAAAATGGTGGCACTCTCCTTTGTCTCTAAAGCGAAGTCAGCCTTCCATTCTGCGGCTGCCAAAGCCGAGCGGGTTCTCGTGGAGATTAAATCCGAGCGAGGTCCTGATAAAAAATCGCCCAACAGATTGACTAGGCAACCTGAAGATGAATCTCCTCAGAACGAGAGCGAGTCAAAGCTTCACAGTGAATTGAGGCACATAAAGTGGCGACCTGCATCTATAGGAATAAAGCAGGATTGGCAAGATAAGATTAAAAACATTCGAATAAGGAGAAAAGAAGTTGAATATATGGATGAAATCCGAGATACAACGAAGGTTGTTTCACTTTATGATGAAAATTTGTACCTCGTGAATATGGAAGATATTCTTGAGGCCAAGGTTTCAGAAGTAGCTTCCTCAGTTGAAGGCTTAACTGGTGTTACCAAAGATCCCATTCGTCCATCATCTGTAACTAAAGATCCCATTCCTCCATCATCTGTGCTGAAGCAATTGGCTACAGCTGTTCAGGCTGGAAGGAAAGCAAAGTCAATGAAAGATCTTATAGCTTCAACAGGAGGTTCTTCACCTCTTCAAGAGAGGGCAGGCTTAAGTCTGTCTGCAGTGAAGGCATTAGTTTTGCGTGAAAAGGAGGACAAGCTTACCTCAGACTTTAGTAATGATGAGAAACTTCTTTATATGACTAATTCTCTATTTGATCCAGTGGGAGAATTCTGCAAGAGGAAGATCAACTATGGTTCAGAGGAAACCAACATATCATCCTTGCCAAGAGATATTCATGGGTCTCCTCCAGAAAGCCTTGTTGTTAAGCTGGCTGAAGTCATGGGAAACTTCAGGAACCTAAGAAAAATGGCTCTGTTTTGGTGCAGGGTTGTTGTTGAACTGAGAAAACTTTGGTCTGAGGAGCGACATTTACCTGGAGTCCCCATGAATGAGATTCCAGATTTGAAGTCATGCCTACTCAATCAACAACTTCAAGTAATTAATTGTTGTATCTCCCGAAAAAGGCACCGTGTTATTGCCACTGAATCCCTGGACTCTATGTTAGTAAAAGCCAGTTCAAATATATATGAATCAGTTGATTATAGTGACACAGTTTCTTCAAGCCCTATTCAGTATGCTAGATTAAGTACTGGGCAGTTCGTTGTTCGACTTGGTGCTGATTGCCCTTCTGGAAATCTGGTGTTGTTGGAAACTGGCGAGCCTGTCTATTCTCCTGTCACCCAGGAAGGACCTTTGCTTACAGAAGATCAGATCAAAGAAACAGAGGAATTTGTGCTGCAGACAGGAAGTGTTGGTGCTGCATGCTCTCAACTCTTCTCTGATATGCAGGCTTTCAAGGCTGCAAACCCAGGCTGCATTATGGAGGACTTTGTGAGATGGTACTCTCCTCCTGATTGGAAAGAAAGGAAGCCAAGTACCGAGGCCCAAGAATCTTTAGATGGTAGTGAGTCATTGTCCACCAGAGGTCAGCTAAGTCTGCGGATGCAAAAGGAAGGCAATTTATGGCGTGAATTATGGGAAGCAGCTAAACCAGTGCCAGCTGTTAAACAGGCACCTCTATTTGATGAGGATTTGGCAGTGGAGGATATCCTGAATGCTTTTGAGGACATCCAGCCTTCTGAGCTTTTTGAACAAATGTTTATTTCATTACTTGGTTTAGGATTTGCGATTGCTGAACCTATGCTATCTGGTAACAATGACTTCTCAAAGTTGTTCTATGACTGCAAGGAGTACATTGTTGTCACCTGCCAAGGCAACAATTGGAGTGAGAAAGTTGATGACCTTTGCCAGGTATATGAATCAGTAGAGACAATGTTACTGAATCCTGAGGAAGCACTAAGGATAATGAAGCAGACCGAAGAACAACCGATGACTTCCGGTGATCTAAAGGATCGGTTTAAGAGGCTTAGCCTTATCTTTGGTGGCAAAGATAAGTTCTTGAGAAGGCCAGTCTCCAAATACAAGATAAACAATGAAGAGAACCCTATTCGACAATCATTTTCAAGTTTCTTTGACAGCAAGTCATCTTTATTTTCAAAGAAACCCAGTCCTGAGAGATCATTCACTGCTGAGAACCCTCCTTGTCTAGAAAGTGACTACTGGATGGTTGTCTAG 2301 0.432 MISASLSLRQFSPLVQSSASVPGRLLPLSLSLSRGRVLSLSHYKYSTREYLSKLQPAHQKRRKMVALSFVSKAKSAFHSAAAKAERVLVEIKSERGPDKKSPNRLTRQPEDESPQNESESKLHSELRHIKWRPASIGIKQDWQDKIKNIRIRRKEVEYMDEIRDTTKVVSLYDENLYLVNMEDILEAKVSEVASSVEGLTGVTKDPIRPSSVTKDPIPPSSVLKQLATAVQAGRKAKSMKDLIASTGGSSPLQERAGLSLSAVKALVLREKEDKLTSDFSNDEKLLYMTNSLFDPVGEFCKRKINYGSEETNISSLPRDIHGSPPESLVVKLAEVMGNFRNLRKMALFWCRVVVELRKLWSEERHLPGVPMNEIPDLKSCLLNQQLQVINCCISRKRHRVIATESLDSMLVKASSNIYESVDYSDTVSSSPIQYARLSTGQFVVRLGADCPSGNLVLLETGEPVYSPVTQEGPLLTEDQIKETEEFVLQTGSVGAACSQLFSDMQAFKAANPGCIMEDFVRWYSPPDWKERKPSTEAQESLDGSESLSTRGQLSLRMQKEGNLWRELWEAAKPVPAVKQAPLFDEDLAVEDILNAFEDIQPSELFEQMFISLLGLGFAIAEPMLSGNNDFSKLFYDCKEYIVVTCQGNNWSEKVDDLCQVYESVETMLLNPEEALRIMKQTEEQPMTSGDLKDRFKRLSLIFGGKDKFLRRPVSKYKINNEENPIRQSFSSFFDSKSSLFSKKPSPERSFTAENPPCLESDYWMVV 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1571 766 MobiDBLite consensus disorder prediction 92 124 - -
Dere04g1571 766 Pfam Rab3 GTPase-activating protein catalytic subunit 444 597 IPR026147 -
Dere04g1571 766 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 52 751 IPR045700 GO:0005096|GO:0043547
Dere04g1571 766 MobiDBLite consensus disorder prediction 529 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1571 Dere-ChrDere04 17447031 17457131 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1571 04 17447031 17457131 Dere05g1352 05 22158444 22168452 CCT
Dere04g1571 04 17447031 17457131 Dere04g1571 04 17447031 17457131 ECH