Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1013 ATGGTGTTGAAGAAGAGGCTACATAATGGATTCCATGGCTTCCAGGTCCCTTTTATACCTAGAGCTCCTAGATCTGTAAGAAGGAGGGGTCTCTCCAAGAAAGCAGATGAAGATGGTCAAGTTTGTGCTATTGAACTACTGGCATCTTTAGCTGGCAAATTGTTGCAGGAGAGTGAAAGTTCTGCTTCTAGCAATGCATCGGAAGGAAATCCCCAGCAGGAAAGTCAAGTCGAAGAGAAGCCATTAGTGACAGAAGGTGTTCATCATGGAAGTTGTGCAGAGAGTACTTTTATCACTGAGGTAGTCTCACAAAATTCTAGCCGGAAGTATCTTGTGCAAACTGCAACTGATGCTGTACATGAACGCAATTCAGTTACTAACCATGCTGACTTCTGTGAGGAAATCAAACCTGACATTAAGTCTGAAATTTGCAAATGGGAGGTCCATGTTGGACAGTATTCTAGTAGGCTAGCAGATGCACCCCAAAATTTTAGGGAGTCTTGGAATAATGGTAACATAAACAATGGTTTTAAAACGAAACAAGAGGCTGGGAGTTCAGCCATTGCAGGACCTAGTTTCGCTGATAAATGTAGTTTGAAGGATCCGTTGAAATTGTGTGTTAACTCTCGTGCGATAATTAAATCAGATAGTAAAGTTAGTTCTCCCTTCTGTAAAGGAACTTTTTCCAGTACTTCCTTTTCTAGGTATGGCAATGATAGTAAGTTAGGTTTTAGAGATGATGATGAAAACTTTACATGGTGTGACAAATTTCGCACCAAGTCAAAGGCTTTTAGGCCTCTGCAACGAATTGCACACCGAAGAATCAGGAAGCTCCTGGCTTCCAAATACTGGAAGGTTGCTCCAAAGTTGAAGGATTGTGAACTTTCCAGATCTGGTGGTAGAGCTAAACCTCTTTTTCGAAAGAGGAAGACTTGTCACGGTGTTGAAAGAGGTCAGCATGACACTCGTTTCAAGAGGAGGAAAATCTCTAACCGCAGTTCAGGTCTGACTTCTGATGGAGGATTCAGCAGTGAAAGTGTATCGAATTCACTTGGGAAAGGAATGGATGTAGAAAACCCTAGCTCATCTTCAAAACAGTGCGTATCGAAGGCTTCTCATGTGAAGTTTAGCATTAAGTCTTTCAAAGTGCCAGAGCTTTACATTGAGGTTCCTGAAACTGCAACTGTTGGTTCACTAAAGAGGGCAGTTATGGAGGCAGTGATGACTATACTTGGAGGTGGAGTGCATGTAGGTGTTCTTCTTGAGGGGAAAAAAATTAGAGATGACAACGGAACTCTTTTGCAGACTGGTTTATCTTGTGAGAATAATATGGATACCCTTGGTTTCACGCTGGAACCCAGTTCTTTACAAGATTCTCCATCTGAATGTGTTGGTGATCCTTCTTCTCATTACGAAACATCCCATTCAAACAGGTCACCGAGAACTCCTGTATTAGATTCAGGAATTACTGATGTCTTACACATCTCCCCCTTGCCGACTAATACGGGCAACCTCTTTGAAAGTAACCGTGAATCTATATCTTCTCCCACTGACACAATGACTTACAAAATAGCACCAGATTCCAGAGCCCTAGTCACTGTTCCTGCTAGGAGTGCAGAACCACTGGCTGTGGTTCCTGTGAGTCAGAAAACTAGGCGCTCTGAACTTGTACAGCGTCGAACTAGGAGACCCTTCTCAGTGGCCGAGGTCGAAGCACTTGTTCAGGCTGTTGAGGAACTTGGAACTGGAAGGTGGCGCGATGTTAAGTTGCTTGCTTTTGAAAATGCAGACCATAGGACTTATGTAGACTTGAAGGATAAATGGAAAACTTTAGTGCACACGGCAGGAATCTCCCCTCAACAGAGGAGGGGAGAGCCAGTGCCTCAGGAGCTGTTGGACAGAGTGTTGGCTGCTCATGCTTTCTGGTCTCAGCATCAAGCCAAGCAGCAACATGGGAAGCATCAAGCCGGTACAATGAAGAGTGAAGAAGCCTCAGCTCCTGAAAAGCCCAGTATTGGTGAAGGTACCATCCAACCAGTTGTGATGATGTAA 2052 0.4391 MVLKKRLHNGFHGFQVPFIPRAPRSVRRRGLSKKADEDGQVCAIELLASLAGKLLQESESSASSNASEGNPQQESQVEEKPLVTEGVHHGSCAESTFITEVVSQNSSRKYLVQTATDAVHERNSVTNHADFCEEIKPDIKSEICKWEVHVGQYSSRLADAPQNFRESWNNGNINNGFKTKQEAGSSAIAGPSFADKCSLKDPLKLCVNSRAIIKSDSKVSSPFCKGTFSSTSFSRYGNDSKLGFRDDDENFTWCDKFRTKSKAFRPLQRIAHRRIRKLLASKYWKVAPKLKDCELSRSGGRAKPLFRKRKTCHGVERGQHDTRFKRRKISNRSSGLTSDGGFSSESVSNSLGKGMDVENPSSSSKQCVSKASHVKFSIKSFKVPELYIEVPETATVGSLKRAVMEAVMTILGGGVHVGVLLEGKKIRDDNGTLLQTGLSCENNMDTLGFTLEPSSLQDSPSECVGDPSSHYETSHSNRSPRTPVLDSGITDVLHISPLPTNTGNLFESNRESISSPTDTMTYKIAPDSRALVTVPARSAEPLAVVPVSQKTRRSELVQRRTRRPFSVAEVEALVQAVEELGTGRWRDVKLLAFENADHRTYVDLKDKWKTLVHTAGISPQQRRGEPVPQELLDRVLAAHAFWSQHQAKQQHGKHQAGTMKSEEASAPEKPSIGEGTIQPVVMM 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1013 683 MobiDBLite consensus disorder prediction 643 683 - -
Dere05g1013 683 MobiDBLite consensus disorder prediction 452 486 - -
Dere05g1013 683 Gene3D - 550 654 - -
Dere05g1013 683 MobiDBLite consensus disorder prediction 58 85 - -
Dere05g1013 683 MobiDBLite consensus disorder prediction 58 79 - -
Dere05g1013 683 MobiDBLite consensus disorder prediction 331 364 - -
Dere05g1013 683 SUPERFAMILY Homeodomain-like 563 644 IPR009057 -
Dere05g1013 683 SMART sant 561 614 IPR001005 -
Dere05g1013 683 MobiDBLite consensus disorder prediction 316 364 - -
Dere05g1013 683 ProSiteProfiles Myb-like domain profile. 557 612 IPR001005 -
Dere05g1013 683 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 656 IPR031105 -
Dere05g1013 683 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 558 616 IPR017930 -
Dere05g1013 683 MobiDBLite consensus disorder prediction 452 484 - -
Dere05g1013 683 CDD SANT_TRF 563 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1013 Dere-ChrDere05 16340544 16343787 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0316 12 5476054 5489792 Dere05g1013 05 16340544 16343787 ECH
Dere05g1013 05 16340544 16343787 Dere05g1013 05 16340544 16343787 ECH