Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0729 ATGTGGAGGCCAACTTATGGCATTAGTTTTAACACGCAAAAACGCAAGAGACTCCTCGGATCCCACGTTTCATCCATCCCAACCATACTTCATGAAAATGGGAATTGCGTGTTGCATTGTGGTTTGCTTAATTCCAGTGTTACTATAATCACAGATATTTTAGAACATGTTAAGAATGACACTCCACCACCTGGTCATGAAAAATCTACCACTTGGTGGGCGATGGAGTTGAGACGTTTCTTCAGATATCAGAATTGTGATTTCATATCTCATTTTCAATCCATAGACAAAATGGGTGAGGAGGCCAAACAGGAACAACAACCCAAGCCAGAGGAGAAGAAAGAAGAGAAGCAAGAAGAGAAAGCAGAGGAGAAGATAGAAGAGAAGGCAGAGCAGAAGAAGGAAGAGCCCAAGCCACCATCACCATGTGTGCTGTTAGTGGACCTGCATTGTGTGGGATGTGCCAAGAAAATTCAGAAATCTATTATGAAAATGAGAGGAGTTGAGGGAGTGGTCATTGAAATGGCTAAAAATGAAGTGACCATAAAGGGAATAGTGGAGCCTCAAGCAATCTGCAACAGAATTACCAAGAAAACAAAGAGAAGAGCCAAAATTATATCTCCATTGCCTGAAGCAGAAGGAGAACCTATACCAGAGGTTGTAACCTCCGAGGTTAGTGGACCAGTAACAGTGGAACTTTATGTGAACATGCACTGTGAGGCCTGTGCTGGGCAACTCAAAAAGAAGATACTCAAAATGAGAGGAGTGCAAACAGCAGTGACAGAGCTTAGCACAGGGAAGGTGACAGTGACAGGGACGATGGACGCAAACAAGCTAGTGGATTATGTGTATAGGAGCACCAGAAAGCAGGCCAAAATAGTGCCACAGGCAGAGCCTGAGCCAGAGAAGAAAGAAGAAAGCAAAGAAGCAGAGAAACCAGCAGAAAAGGGGGAGAAGAAAGAAGAGGAGAAAGCAGCAGAGGAAGGGAAGAAAGAGGAGGGTGATGGAGGTGGTGAAAGTAAGAGTGGGAATAGAGAAGAAAAGGGTGGGGAAGAAGGGAAAGAAGGAGAGGGAGAACAAATAGAGGTGATGAACATGGAAGAGGAAGGGATGAAGAGGATGATGTACTATTACCAGCCACTCTATGTCGTTGAAAGAATCCCACCTCCTCAGCTCTTCAGTGACGAAAACCCAAATGCATGTTGCATTTCGTGA 1215 0.4444 MWRPTYGISFNTQKRKRLLGSHVSSIPTILHENGNCVLHCGLLNSSVTIITDILEHVKNDTPPPGHEKSTTWWAMELRRFFRYQNCDFISHFQSIDKMGEEAKQEQQPKPEEKKEEKQEEKAEEKIEEKAEQKKEEPKPPSPCVLLVDLHCVGCAKKIQKSIMKMRGVEGVVIEMAKNEVTIKGIVEPQAICNRITKKTKRRAKIISPLPEAEGEPIPEVVTSEVSGPVTVELYVNMHCEACAGQLKKKILKMRGVQTAVTELSTGKVTVTGTMDANKLVDYVYRSTRKQAKIVPQAEPEPEKKEESKEAEKPAEKGEKKEEEKAAEEGKKEEGDGGGESKSGNREEKGGEEGKEGEGEQIEVMNMEEEGMKRMMYYYQPLYVVERIPPPQLFSDENPNACCIS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0729 404 MobiDBLite consensus disorder prediction 100 140 - -
Dere05g0729 404 SUPERFAMILY HMA, heavy metal-associated domain 144 198 IPR036163 GO:0046872
Dere05g0729 404 SUPERFAMILY HMA, heavy metal-associated domain 230 285 IPR036163 GO:0046872
Dere05g0729 404 ProSiteProfiles Heavy-metal-associated domain profile. 140 203 IPR006121 GO:0046872
Dere05g0729 404 MobiDBLite consensus disorder prediction 100 138 - -
Dere05g0729 404 ProSiteProfiles Heavy-metal-associated domain profile. 228 302 IPR006121 GO:0046872
Dere05g0729 404 MobiDBLite consensus disorder prediction 292 362 - -
Dere05g0729 404 Pfam Heavy-metal-associated domain 234 280 IPR006121 GO:0046872
Dere05g0729 404 Pfam Heavy-metal-associated domain 147 197 IPR006121 GO:0046872
Dere05g0729 404 MobiDBLite consensus disorder prediction 295 362 - -
Dere05g0729 404 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 98 404 IPR044258 GO:0046872
Dere05g0729 404 Gene3D - 142 205 - -
Dere05g0729 404 Gene3D - 227 293 - -
Dere05g0729 404 CDD HMA 232 272 IPR006121 GO:0046872
Dere05g0729 404 CDD HMA 149 204 IPR006121 GO:0046872
Dere05g0729 404 Coils Coil 112 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0729 Dere-ChrDere05 12798449 12801591 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0729 05 12798449 12801591 Dere04g1298 04 14742753 14744817 CCT