Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1771 ATGGCAGTGCAAAACTCTCTTCACATAGCAGGTTCTGCTTATGATGATGATGGACGACCCAAAAGGACCGGAACACTGATAAGTGCTGTTGCTCACATCATAACTGCTGTGATTGGTTCTGGTGTGCTTTCTTTGGCTTGGAGCACTTCCCAGTTAGGATGGATTGGTGGCCCTGTTTCCTTGCTTTTCTGTGCAATTGTCATCTTCGTTTCCTCCTCCCTCCTCTCTGATTGTTACAGAACTTCTGATGCCGTCGCTGGCAAGAGAAACTACTCTTACATTGCAGCTGTTAGAGTCTATCTAGGTAATACAAGGACATGGTTGGCTGGTTTCCTTCAATATCTGACCTTGTATGGGACCTCTGTTGCTTATGTAATTACCACAGCAACCTCTTTAAGAGCAATTATGAGGGCAAACTGCTATCACAGGGAAGGGCACAATGCTTCTTGTAATTATGGGGGTAACGTGTATATGGTGTTATTTGGGATTATTCAGATTATTATGTCATTCATACCAGATCTCCACAACATGGCGTGGGTTTCTGTTGTTGCTGCAATAATGTCCTTTACATATTCCTTCATTGGACTAGGACTTGGGATTGCTACAACTATACAAAATGGGAAAATTATGGGGAGTCTAACAGGTATACCTGCTAAAAGCGGGGCTCAAAAAGTATGGCTAGTCTTTCAAGCACTTGGTGATGTTGCCTTTTCCTATCCATACTCAGTCATTCTTCTTGAGATACAGGATACTCTAGCGTCTCCTCCACCAGAAAACCAGACCATGAAGAAGGCATCCATGGTCTCAATCTTCATCACAACTTTCTTCTACCTTTGTTGTGGATGCTTTGGATATGCAGCATTTGGAAACGACACCCCAGGAAACCTCTTGACAGGGTTTGGCTTTTATGAGCCTTACTGGCTCATTGACATAGCTAACGCTTGCATTGTTATTCATTTGGTGGGAGGATATCAGATTTACAGTCAGCCATTATTCAGTGCTGCAGAAAGATGGGCTTCAAGGAGATTCCCAAACAGTGGGTTTGTGAATCATTTCTACAACTTGAAACTACCTCTATTGCCAAGCCTCCAGCTAAATCTTTTCAAGTTTATCTTTAGAACAGCCTATGTGATTTCAACCACAGTCCTGGCCATCGTCTTTCCTTACTTCAACCAAGTTCTAGGAGTGTTAGGGGCCTTGAACTTTTGGCCATTGGCTATATACTTCCCAGTGGAGATGTACTTTGTACAGAAGAAAATCCCAGCTTGGAGTAGAACATGGATTGTTTTAAGAATTTTTAGCTTTGTTTGCTTTCTTGTTACACTAGTAGGCCTTGTTGGGTCCATTGAAGGAATCATCGCTGAGAAACTTAGCTGA 1377 0.4263 MAVQNSLHIAGSAYDDDGRPKRTGTLISAVAHIITAVIGSGVLSLAWSTSQLGWIGGPVSLLFCAIVIFVSSSLLSDCYRTSDAVAGKRNYSYIAAVRVYLGNTRTWLAGFLQYLTLYGTSVAYVITTATSLRAIMRANCYHREGHNASCNYGGNVYMVLFGIIQIIMSFIPDLHNMAWVSVVAAIMSFTYSFIGLGLGIATTIQNGKIMGSLTGIPAKSGAQKVWLVFQALGDVAFSYPYSVILLEIQDTLASPPPENQTMKKASMVSIFITTFFYLCCGCFGYAAFGNDTPGNLLTGFGFYEPYWLIDIANACIVIHLVGGYQIYSQPLFSAAERWASRRFPNSGFVNHFYNLKLPLLPSLQLNLFKFIFRTAYVISTTVLAIVFPYFNQVLGVLGALNFWPLAIYFPVEMYFVQKKIPAWSRTWIVLRIFSFVCFLVTLVGLVGSIEGIIAEKLS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1771 458 PANTHER OS05G0424000 PROTEIN-RELATED 28 449 - -
Dere04g1771 458 Pfam Transmembrane amino acid transporter protein 23 453 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1771 Dere-ChrDere04 20246863 20249562 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1771 8 440 Organic Solute Cotransporters AT1G77380 55.963 0.0 526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1771 04 20246863 20249562 Dere05g1202 05 19278495 19282569 CCT
Dere04g1771 04 20246863 20249562 Dere04g1771 04 20246863 20249562 ECH