Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0571 ATGGGGAAGGGAGGAATTCTCCCAATTGATGACAAAACAGACAGGCTTTTCTCTATCTCTGGTTTGGGGTCGCAATGGAGTGTTCAAGAGGGCTATTATCATCCAGGAGGTTTATTTGCCAGCGTCGGTCAGATGGGAATGGGGTTTGGCGTTCAACCCAACGCTTCTGATCCCCGCAACAATGGCGACGAAAAACTTCCCTATACTGAATTGTACGTGAAGTATGTGCAATCACAGGGCAATGTTGAGAATGATGGAGCTAAGGAGGACGAAGGGTTCAAGAGTAGGAAGAAGGGTGGCCTTAAACTGAAAATTACGATCAGAAATCCGTCGCTGAGGAGGTTGATTAGTGGCGCGATAGCCGGGGCGGTGTCCCGAACCGCCGTGGCGCCTTTGGAGACTATAAGGACTCATTTAATGGTTGGAAGCAGCGGCCATTCTACTGGTGAGGTGTTCGGCAATATTATGAAGACTGATGGATGGAAGGGCTTGTTCAGGGGTAATCTGGTAAACGTGATTCGGGTTGCACCTAGTAAGGCCATAGAGCTATTTGTTTATGATACAGTCAACAAGAACCTGTCACCAAAGCCTGGGGAACAGCCGAAACTTCCTATTCCTGCATCATTAGTTGCTGGCGCTTGTGCGGGAGTTAGTTCTACCATATGTACATATCCTCTTGAGTTACTCAAGACTCGGCTAACTATTCAGAGAGGTGTTTATGATGGTCTACTTGATGCATTCTTGAAAATAATTCGAGACGAGGGTCCTGCAGAACTTTATCGAGGCCTTGCTCCTAGCCTTATTGGAGTAATTCCATATTCTGCCACCAACTACTTCGCCTATGACACTCTAAGGAAGGCATACCGAAAAATTTTTAAGCAAGAGAAGATTGGAAACATTGAAACCCTTTTGATCGGATCAGCAGCTGGTGCTATTTCAAGTAGTGCTACTTTTCCACTTGAGGTGGCTCGCAAGCATATGCAAGTGGGAGCTCTGAGTGGAAGGCAGGTTTACAAAAATGTGATTCATGCACTTGCAAGCATACTTGAACAAGAAGGGATTCCGGGATTATATAGAGGGTTGGGACCAAGCTGTATGAAGTTAGTACCAGCCGCTGGAATCTCTTTCATGTGCTATGAAGCGTGCAAGAGGATACTGATTGAGAAAGATGACGAGGAATAG 1182 0.4619 MGKGGILPIDDKTDRLFSISGLGSQWSVQEGYYHPGGLFASVGQMGMGFGVQPNASDPRNNGDEKLPYTELYVKYVQSQGNVENDGAKEDEGFKSRKKGGLKLKITIRNPSLRRLISGAIAGAVSRTAVAPLETIRTHLMVGSSGHSTGEVFGNIMKTDGWKGLFRGNLVNVIRVAPSKAIELFVYDTVNKNLSPKPGEQPKLPIPASLVAGACAGVSSTICTYPLELLKTRLTIQRGVYDGLLDAFLKIIRDEGPAELYRGLAPSLIGVIPYSATNYFAYDTLRKAYRKIFKQEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYKNVIHALASILEQEGIPGLYRGLGPSCMKLVPAAGISFMCYEACKRILIEKDDEE 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0571 393 Gene3D Mitochondrial carrier domain 107 391 IPR023395 -
Dere04g0571 393 SUPERFAMILY Mitochondrial carrier 110 381 IPR023395 -
Dere04g0571 393 PRINTS Mitochondrial carrier protein signature 260 278 IPR002067 GO:0055085
Dere04g0571 393 PRINTS Mitochondrial carrier protein signature 167 187 IPR002067 GO:0055085
Dere04g0571 393 PRINTS Mitochondrial carrier protein signature 127 141 IPR002067 GO:0055085
Dere04g0571 393 PRINTS Mitochondrial carrier protein signature 114 127 IPR002067 GO:0055085
Dere04g0571 393 PRINTS Mitochondrial carrier protein signature 306 328 IPR002067 GO:0055085
Dere04g0571 393 PRINTS Mitochondrial carrier protein signature 218 236 IPR002067 GO:0055085
Dere04g0571 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 297 385 IPR018108 -
Dere04g0571 393 FunFam Adenine nucleotide transporter BT1, chloroplastic/mitochondrial 107 390 - -
Dere04g0571 393 PANTHER SOLUTE CARRIER FAMILY 25 104 386 - -
Dere04g0571 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 287 IPR018108 -
Dere04g0571 393 Pfam Mitochondrial carrier protein 297 389 IPR018108 -
Dere04g0571 393 Pfam Mitochondrial carrier protein 203 290 IPR018108 -
Dere04g0571 393 Pfam Mitochondrial carrier protein 111 193 IPR018108 -
Dere04g0571 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 192 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0571 Dere-ChrDere04 5683248 5686613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0571 296 393 Organic Solute Cotransporters AT4G32400 32.000 8.28e-07 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2155 05 31734245 31737038 Dere04g0571 04 5683248 5686613 CCT
Dere04g0571 04 5683248 5686613 Dere04g0571 04 5683248 5686613 ECH