LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere04g0556	ATGGCAGAAATTAAAGAGGAATCAAGTGACAGCACCGTCAGCAACAATGTGGCAATTTCTAAGGAAGAGGAAGTGAAAATTACAAATCAATCAGAGCACTTAAAAGCATCAAACAGTCCTGTCAAGGTCAAGACTGTAAAGGCCCCTAATCCTAAAGGTGTTCATACAAGCGGGGAGAAGAAAAGCAAGGATGGGAAGGATGAAGAGGCACAATCTACTGTTTTAAATGGTTCCTTGACTTTAAAGTCTCGGCAGCCTGCTAAAAGTAGATCTTTCAATGACCATAAGACTCAAATTTCCAAGCGCTCTGAAAAGTCTGTTGCAGCATCTTCTGGAGCACCGACGGAGAATACAAAACCAAAATCATTTAAGAAAGGAACTCTTAATAAAGTTCAAGGAGAACCACAAACTTCTTCAAGTATCACTGTAGAAGATGCAAAACCTCGCAAAGTGGGGATGCTTCCAAATTATGGATTTAATTTCAGGTGCAATGAACGAGCTGAGAGAAGAAGAGAGTTCTACTCCAAGCTTGAGGAAAAGATTCAAGCAAAGGAAGTGGAGAAGAGTAACTTGCAGGCAAAAACCAAGGAGACCCAAGAGGCTGAGATTAAGATGCTTAGGAAGAGTCTCGCATTTAAAGCAACTCCACTGCCGAGTTTTTACCAGGAGCCTCCTCCTCCAAAGGCAGAGTTAAAGAAGATACCCACTACGAGAGCAAAATCTCCTAAGCTTGGTCGGAGGAAGAATTCAATTGACTCACAGTCTGATGAAAACCCTAACAGCTTTGCCGGACAAGGTCGTTTAAGTCTGGATGAGAAAGTGTCCCAGAGTAACCCCACTAAGAGAGCTACTCATGCCCATCAAAAGAAGCCACAACGGAGATCTCTTCCCTCTAGACTGCCTTCTGAAAAGACCGGTTCATCCAATTCTGCAACTATGGCCACATCATCCAAGGCACTGAATGACGAAAAGACCACGTTATCCAGTGTAAAAAATAAAGATATCACCTTGTCCAATGCAAGGGGTAAAGAAAACTCTCAAATGGATGCAGCTGATAAAGAGAATGGTACCTTGTCCTGTAATACAAGTGAAGCTCCATCTCTCATTGAAGAGCATAGTGCAGTTGTCTTAGACAAGCCAATTGAAATGGACCCTCGAGTGAATGGTGACATGGTGGTTGAAGAGCAACCTCAGCTCTTGGTACAGGAACCTATAGTGGCAGATCATTAA	1230	0.4285	MAEIKEESSDSTVSNNVAISKEEEVKITNQSEHLKASNSPVKVKTVKAPNPKGVHTSGEKKSKDGKDEEAQSTVLNGSLTLKSRQPAKSRSFNDHKTQISKRSEKSVAASSGAPTENTKPKSFKKGTLNKVQGEPQTSSSITVEDAKPRKVGMLPNYGFNFRCNERAERRREFYSKLEEKIQAKEVEKSNLQAKTKETQEAEIKMLRKSLAFKATPLPSFYQEPPPPKAELKKIPTTRAKSPKLGRRKNSIDSQSDENPNSFAGQGRLSLDEKVSQSNPTKRATHAHQKKPQRRSLPSRLPSEKTGSSNSATMATSSKALNDEKTTLSSVKNKDITLSNARGKENSQMDAADKENGTLSCNTSEAPSLIEEHSAVVLDKPIEMDPRVNGDMVVEEQPQLLVQEPIVADH	409

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere04g0556	409	MobiDBLite	consensus disorder prediction	71	87	-	-
	Dere04g0556	409	Pfam	Targeting protein for Xklp2 (TPX2) domain	159	234	IPR027329	-
	Dere04g0556	409	MobiDBLite	consensus disorder prediction	103	144	-	-
	Dere04g0556	409	PANTHER	PROTEIN WVD2-LIKE 4	29	350	IPR044833	GO:0008017
	Dere04g0556	409	Coils	Coil	164	201	-	-
	Dere04g0556	409	MobiDBLite	consensus disorder prediction	1	157	-	-
	Dere04g0556	409	MobiDBLite	consensus disorder prediction	7	24	-	-
	Dere04g0556	409	MobiDBLite	consensus disorder prediction	54	70	-	-
	Dere04g0556	409	MobiDBLite	consensus disorder prediction	298	361	-	-
	Dere04g0556	409	MobiDBLite	consensus disorder prediction	254	282	-	-
	Dere04g0556	409	MobiDBLite	consensus disorder prediction	88	102	-	-
	Dere04g0556	409	MobiDBLite	consensus disorder prediction	213	361	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere04g0556	Dere-ChrDere04	5590324	5593703	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere05g2172	05	31861169	31864439	Dere04g0556	04	5590324	5593703	CCT
	Dere04g0556	04	5590324	5593703	Dere04g0556	04	5590324	5593703	ECH