Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0513 ATGCGGTTGAGGAATGGAAGCCATAATTGCAGTGCCAGTAAGCTGTTCCCTTGTTGTCCGACACAACACTCTGCTATTCCGCATGACTTCCCCAGTTCTCGTTCTTTACAAATGAGTGGTCTTGATCACGGGGACCAAACCCGGTTAACCCGGAATCGCCCCGATCCCCATGAAGTGGAGATGATGGACAAAGGTTCAGGGTTCCAAGTGGTGTGTAAAATGTTAATAAAGCCGCGAAAGAAGAAGCTGGGCACGGTTCCTGTTTACCTCAACGTCTATGATCTCACGCCGATCAATGGCTATGCCTATTGGCTTGGCCTCGGAGTCTACCATTCTGGTGTTCAAGTTCATGGGGTTGAATATGGATATGGAGCGCATGAACATGGAGCGACAGGGATTTTCCAAGTGGAACCGAGACGCTGTCCTGGTTTTACTTTCAGAAAATCAATCTTCATTGGAACAACAGATCTGGGTCCAAAAGATGTTCCGGCATTTATGAACAAACTAGCTCAGGACTACTCCGGCAACACATACCATCTTATCACTAAAAACTGCAACCACTTCTGTAATGATGTTTGTCTCAGATTAACTGCAAACTCTATCCCCAGTTGGGTTAATCGACTGGCTCGAATTGGTTTTTTCTGCAACTGTGTACTTCCACCTGAGCTTCATGAAGCAAAGATTTCACTAGTCCCAATTGTATGGGTAAAGAAGAAGCGACGCCGATTCACCCTCTCCTCTACTTTGGAGACAAATCAGCGTAGCGGAGAAAAGGGGAAATCCATGGAACCCGTCCTGTCAGGGGGTGAGAGGCGAATCGTCTATGACCGTATAGAGACGGCGGGTCGAGCCGACACCAACCATTACGAAAAAGGGAAATCTTTGGGCCATTATATCCTTGATGACTGCCATACATCTATTCATTTCTTTAGGATTTAG 939 0.4665 MRLRNGSHNCSASKLFPCCPTQHSAIPHDFPSSRSLQMSGLDHGDQTRLTRNRPDPHEVEMMDKGSGFQVVCKMLIKPRKKKLGTVPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGYGAHEHGATGIFQVEPRRCPGFTFRKSIFIGTTDLGPKDVPAFMNKLAQDYSGNTYHLITKNCNHFCNDVCLRLTANSIPSWVNRLARIGFFCNCVLPPELHEAKISLVPIVWVKKKRRRFTLSSTLETNQRSGEKGKSMEPVLSGGERRIVYDRIETAGRADTNHYEKGKSLGHYILDDCHTSIHFFRI 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0513 312 Gene3D PPPDE domains 82 227 IPR042266 -
Dere04g0513 312 SMART DUF862_2a 86 224 IPR008580 GO:0008233
Dere04g0513 312 PANTHER DESUMOYLATING ISOPEPTIDASE 85 237 IPR008580 GO:0008233
Dere04g0513 312 ProSiteProfiles PPPDE domain profile. 86 223 IPR008580 GO:0008233
Dere04g0513 312 Pfam PPPDE putative peptidase domain 87 220 IPR008580 GO:0008233
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere04g0513 Dere-ChrDere04 5198748 5202586 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1929 05 29276127 29278542 Dere04g0513 04 5198748 5202586 CCT