Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0497 ATGAAGTTTATGAAGTTGGGTTCGAAGCCTGATGCCTTTCAAGCTGATGGAAAGTCTATCAGGTATGTGTCATCTGAATTGGCTACAGATGTGGTCATAAACGTTGGCGAAGTGAAGTTTTACCTTCACAAGTTCCCACTTCTGTCCAAGAGCAATCAATTGCAGAAGCTGGTATCAAAGGCTAACGAAGAGGATTCTGATGAAGTTTTCTTGGCTGATTTCCCTGGAGGGCCCAAGGCGTTTGAAGTATGTGCAAAGTTCTGCTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTGGCTGCTTGCTGCGCAGCTGAGTACCTTGAAATGACTGAGGATATTGATAGGGGAAACTTAATTTTTAAAATTGAGGTGTTTCTGAACTCAAGCATCTTTCGCAGCTGGAAGGACTCCATAATTGTTTTACAAACTACTAAATCTCTTCTGCCGTGGTCTGAGGATCTGAAGATCATTGGCAGATGCATAGATTCCATAGCTTCTAAAACTTCCGTGGACCCAGCAAACATCACATGGTCCTACACGTATAACCGGAAAATAACTGAGCCTGATAAAATAACTGAGCACAAGATGACATATCAAGAGAAAATTGAGTCTGTTCCTAAAGATTGGTGGGTTGAAGATATTTGTGAGCTGGACATTGATCTCTACAAACGCGTGATGATTGCTGTGAAATCAAAAGGAAGAATGGATGGTGCTGTAATTGGGGAGGCACTAAAAATCTATGCAGTTAGGTGGTTGCCTGATTCTATTGATGCATTGGTTTCTGAAGCTCAAGCATGGAGGAACAAATCTCTGGTAGAAACAATTGTCTGTCTAATGCCATCTGACAATGGTGTGGGTTGTTCATGTTGTTTCTTGTTGAAGCTATTGAAAGTGGCCATATTAGTTGGAGCAGATGAGTCCTCAAAAGAAGAATTAATGAAGGGCATCTGCCTAAAATTGCATGAAGCTTCTGTCAAAGATTTATTGATCCCTGCACGGTCTCCTTTGAGTACCATATATGATGTTCAGTTAGTACAATGCCTTTTGAATCGATACATGAAAGAGAAGGGCATCAGCTGCGATATGGAAGTTGCTGAGAAGAAGGATAAAGGAAATGATAAAGCTATTTTTGGGCATAGGTCCTTTCTGAATATTGGCAAGTTGGTTGACAGTTTTCTTGCTGAAATTGCACATGATCCGAATCTCAGCCTCTCTAGTTTTGTTGACTTGGCCCAAACAGTTCCAGGGTTTGCTAGACCAAATCATGATGGTCTCTACAGAGCTATTGACATTTACTTGAAGGAGCACCCAAATATGACAAAAGCTGAAAGGAAGAAGCTCTGTGGACTGATGGACGTGAAGAAATTGACAATGGATGCATCTATGCACGCTGCACAGAATGAGCGTCTTCCACTACGGGTGGTAGTGCAGGTCCTCTTTTTCGAGCAGGTCAGAGCCTCTGCCAGCGTTCAAGCTCTTGATAATAATAATCCATGTAGGCCTTCGCGCTCAGCGATGAGTGCAGATGAAGAATGTGAGAGAACTGTGGGAGAGAAATGTCAATCCCTCAAGAACCAGATGTGTCATTTGAAGAAAGATGAAGAATTCCGCAAGAACGGCAACCTTAGTAAGAAGAACAGCAAAAACAGCAGAAGTGGAATACAATTGCTACCTTCACGCTCAAGGAGAATCTTTGATAAGTTATGGACTGTTGGTAAGGGACAAGGAGAGAACAGGAGCTCCGAGACCTCGGGAAGTTCTAATAGCCCAACATCTGTTGTCCCAGGAGACACCAAATCATCTGGTTCATCTTCTAGACACAGGAGGCATTCTATCTCGTAG 1851 0.4246 MKFMKLGSKPDAFQADGKSIRYVSSELATDVVINVGEVKFYLHKFPLLSKSNQLQKLVSKANEEDSDEVFLADFPGGPKAFEVCAKFCYGMTVTLNAYNVVAACCAAEYLEMTEDIDRGNLIFKIEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIIGRCIDSIASKTSVDPANITWSYTYNRKITEPDKITEHKMTYQEKIESVPKDWWVEDICELDIDLYKRVMIAVKSKGRMDGAVIGEALKIYAVRWLPDSIDALVSEAQAWRNKSLVETIVCLMPSDNGVGCSCCFLLKLLKVAILVGADESSKEELMKGICLKLHEASVKDLLIPARSPLSTIYDVQLVQCLLNRYMKEKGISCDMEVAEKKDKGNDKAIFGHRSFLNIGKLVDSFLAEIAHDPNLSLSSFVDLAQTVPGFARPNHDGLYRAIDIYLKEHPNMTKAERKKLCGLMDVKKLTMDASMHAAQNERLPLRVVVQVLFFEQVRASASVQALDNNNPCRPSRSAMSADEECERTVGEKCQSLKNQMCHLKKDEEFRKNGNLSKKNSKNSRSGIQLLPSRSRRIFDKLWTVGKGQGENRSSETSGSSNSPTSVVPGDTKSSGSSSRHRRHSIS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0497 616 Gene3D Potassium Channel Kv1.1; Chain A 15 118 IPR011333 -
Dere04g0497 616 Pfam NPH3 family 211 464 IPR027356 -
Dere04g0497 616 CDD BTB_POZ_NPY3-like 21 124 - -
Dere04g0497 616 PANTHER OS12G0117600 PROTEIN 24 564 IPR043454 -
Dere04g0497 616 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Dere04g0497 616 MobiDBLite consensus disorder prediction 577 604 - -
Dere04g0497 616 MobiDBLite consensus disorder prediction 573 616 - -
Dere04g0497 616 SUPERFAMILY POZ domain 22 115 IPR011333 -
Dere04g0497 616 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Dere04g0497 616 Pfam BTB/POZ domain 25 116 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0497 Dere-ChrDere04 4970932 4974455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0497 22 487 EF-hand Containing Proteins AT3G44820 34.413 5.75e-92 295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1906 05 28974401 28977882 Dere04g0497 04 4970932 4974455 CCT