Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0017 ATGAAAGGAGCGGCACTAGTGGCTATTGCTGCTTCCATTGGTAATTTTCTGCAAGGATGGGATAATGCTACTATTGCTGGTGCCATTGTTTACATTAAGAAGGATCTTGCTCTGCAAACAACTGTTGAAGGACTTGTGGTGGCCATGTCCCTCATTGGTGCAACATTGATCACAACTTGCTCTGGTCCCATATCAGATTGGGTCGGTCGCCGTCCAATGTTGATAATATCATCTATGCTTTATTTTTTGAGTGGTTTGGTGATGTTCTGGTCTCCAAATGTGTATATATTATGCATAGCAAGGCTACTAGATGGATTTGGGATCGGTCTTGCTGTTACTCTTGTCCCAGTCTATATATCTGAGACTGCACCTTCTGATATAAGGGGATCATTAAATACACTTCCACAGTTCAGTGGTTCAGGAGGCATGTTTTTATCATATTGTATGGTTTTTGGGATGTCATTGACAACCTCGCCTAGCTGGAGACTAATGCTTGGGGTTCTTTCTATTCCCTCTCTCATCTATTTTGTATTAACAATATTTTTCTTGCCTGAGTCTCCTCGGTGGCTAGTGAGTAAAGGAAAAATGCTTGAGGCTAAAAAAGTTCTTCAAAGATTACGTGGCAGGGAAGATGTGTCAGGGGAAATGGCATTGCTGGTTGAAGGTCTTGGGATTGGAGGTGAAACATCTATAGAAGAGTATATTATAGGCCCTGCTGATGAATTTGCTGATGGCCAGGAACCAACAACAGAGAAAGATAAAATCCGGTTATATGGATCCGAAGCAGGCCTCTCTTGGGTTGCAAAACCTGTCACTGGACGCAGTTCTCTGGGACTAGCATCGCGCCAGGGAAGCATTGTCAACCAAAGCATGACTCTCATGGACCCTCTTGTGACTCTTTTTGGGAGTGTGCATGAGAAGCTCCCTGAGACAGGAAGCATGGTTTTTCCAAACTTTGGAAGCATGTTCAGCACAGCTGAGCCTCATATTAAAAATGAACAGTGGGATGAAGAGAGCCTACAGAGAGAAGGTGAAGACTACACCTCAGATGCTGCAGCTGGGGACTCTGATGACAATTTGCACAGTCCTCTAATCTCACGTCAGACAACAAGTATTGAAAAGGAGATGGCTCCTCCTTCCCACGGCAGTATCCTGAGCAGCATGAGGCGTCACAGTAGTCTCATGCAAGGATCAGGTGAGGCAGTTGGTAGTACAGGCATTGGTGGTGGCTGGCAGCTGGCATGGAAATGGTCTGAGAAAGAAGGTGAAGATGGAAAAAAACAAGGAGGATTCAAAAGGATTTATTTGCACCAGGAGGGAGCTCCTGGATCTCGACGTGGCTCCCTTGCATCAATTCCTGGTGAAGTTCCTGGTGAAGGTGAATTTGTCCAGGCTGCTGCCTTGGTAAGTCAGCCTGCTCTTTACTCCGAGGAACTCACTGGGCAGCATCCAGTTGGGCCTGCTATGATCCACCCATCCGAGACTGCTTCAAAGGGACCTATTTGGAAAGCTCTGCTTGAACCAGGGGTTAAGCATGCATTATTTGTTGGTATTGGAATACAAATACTTCAGCAGTTTTCAGGAATAAATGGGGTTTTATATTACACTCCTCAAATCCTTGAAGAGGCAGGTGTTGCAGTTCTTCTTGCCAATGTAGGCATTGGTTCAGATTCTGCATCATTCCTTATTAGTGCAGTCACAACCTTGTTGATGCTTCCTTGTATAGGTTTAGCCATGAGGCTCATGGATATATCAGGCAGAAGGCAACTACTACTGACTACAATTCCTGTGCTGATAGTGTCACTCATTATTTTGGTGATTGGAAACATAGTGGACTTTGGCACTGTTGTGCATGCTGTAATATCAACTGCATGCGTTGTGATATATTTCTGCTGCTTTGTGATGGCCTATGGACCAATTCCAAATATACTTTGCTCAGAGATTTTCCCCACAAGGGTCCGTGGGCTCTGTATTGCTATATGTGCTTTAGTGTTCTGGATTGGAGACATCATTGTCACTTACACACTGCCTGTGATGCTTAGTTCCCTTGGACTCGCTGGCGTGTTTGGAATTTATGCTGTTATGTGTTTCATCTCTTGGATATTTGTGTTCTTGAAGGTTCCAGAAACCAAGGGTATGCCCCTCGAAGTCATCACTGAATTCTTTGCTGTTGGTGCGAGACAAACTGCTTCTGCCAAGAATGAGTGA 2208 0.4479 MKGAALVAIAASIGNFLQGWDNATIAGAIVYIKKDLALQTTVEGLVVAMSLIGATLITTCSGPISDWVGRRPMLIISSMLYFLSGLVMFWSPNVYILCIARLLDGFGIGLAVTLVPVYISETAPSDIRGSLNTLPQFSGSGGMFLSYCMVFGMSLTTSPSWRLMLGVLSIPSLIYFVLTIFFLPESPRWLVSKGKMLEAKKVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPADEFADGQEPTTEKDKIRLYGSEAGLSWVAKPVTGRSSLGLASRQGSIVNQSMTLMDPLVTLFGSVHEKLPETGSMVFPNFGSMFSTAEPHIKNEQWDEESLQREGEDYTSDAAAGDSDDNLHSPLISRQTTSIEKEMAPPSHGSILSSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWSEKEGEDGKKQGGFKRIYLHQEGAPGSRRGSLASIPGEVPGEGEFVQAAALVSQPALYSEELTGQHPVGPAMIHPSETASKGPIWKALLEPGVKHALFVGIGIQILQQFSGINGVLYYTPQILEEAGVAVLLANVGIGSDSASFLISAVTTLLMLPCIGLAMRLMDISGRRQLLLTTIPVLIVSLIILVIGNIVDFGTVVHAVISTACVVIYFCCFVMAYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIVTYTLPVMLSSLGLAGVFGIYAVMCFISWIFVFLKVPETKGMPLEVITEFFAVGARQTASAKNE 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0017 735 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 711 IPR020846 GO:0022857
Dere04g0017 735 MobiDBLite consensus disorder prediction 334 362 - -
Dere04g0017 735 ProSitePatterns Sugar transport proteins signature 2. 103 128 IPR005829 GO:0016020|GO:0022857|GO:0055085
Dere04g0017 735 FunFam Monosaccharide-sensing protein 2 475 724 - -
Dere04g0017 735 FunFam monosaccharide-sensing protein 2 2 247 - -
Dere04g0017 735 MobiDBLite consensus disorder prediction 334 349 - -
Dere04g0017 735 Gene3D MFS general substrate transporter like domains 3 254 IPR036259 -
Dere04g0017 735 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 6 728 - -
Dere04g0017 735 Pfam Sugar (and other) transporter 7 220 IPR005828 GO:0016020|GO:0022857|GO:0055085
Dere04g0017 735 Pfam Sugar (and other) transporter 499 722 IPR005828 GO:0016020|GO:0022857|GO:0055085
Dere04g0017 735 ProSitePatterns Sugar transport proteins signature 1. 61 78 IPR005829 GO:0016020|GO:0022857|GO:0055085
Dere04g0017 735 PRINTS Sugar transporter signature 98 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere04g0017 735 PRINTS Sugar transporter signature 524 534 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere04g0017 735 PRINTS Sugar transporter signature 646 658 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere04g0017 735 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere04g0017 735 PRINTS Sugar transporter signature 623 644 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere04g0017 735 Gene3D MFS general substrate transporter like domains 495 733 IPR036259 -
Dere04g0017 735 SUPERFAMILY MFS general substrate transporter 5 716 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0017 Dere-ChrDere04 285129 290203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0017 1 735 Organic Solute Cotransporters AT4G35300 69.987 0.0 982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0017 04 285129 290203 Dere13g0857 13 10789443 10794861 CCT
Dere04g0017 04 285129 290203 Dere04g0017 04 285129 290203 ECH
Dere13g0857 13 10789443 10794861 Dere04g0017 04 285129 290203 ECH