Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0791 ATGCCGGGAATAGTTGCAAATGGAGTTAATGATGAGGGGGGAGCAAATGAAAGGAATGTGAATCCTTCCCCCTCTAAGGAAACCTCAACTCCAGTAGACTCACAGAACCCCGGGAGTGCTAGTCCGGAGATTTGTGCTGATGGGGCAGTTGACACCTCAATTGAGCAGCTTTATGAAAATGTGTATGAGATGCAAAGTTCTGATCAGTCACCCTCAAGGCAAAGTTATGGATCTGATGGTGATGAGTCTAGGATTGATTCAGAGTTGCGTCATCTAGTTGGAGGGCCAATGAGAGAGGTAGAGATAATGGAAGAGGAAATGGAAGAAAATCCAGGAGGTGATGGCAGTAGTGAAAAATCTTCTAGAAAGGGTAGTTCATCAAATGATAGGAAGTTGGAAAAGGTGGATGAGATTCAACCTGCAAGTACAAGTTCCAACTCTTCTGAAAAATCAAACAAGGCATCGAATTCAAAGTTACAACCTAAAACATCAGTAAAATCAAAACCCAAAGTCAAAAGTCCTCCTGCGAAGCCTCCTATTGAGAGAAAGAATGATAAGCCTTTGAGTAAGCAAAACACAGGAAACATTAGCGTGAAGAAATCGCAAAATTCTCCTTCTGGAAAGTCAGTGTCATTAAGTCATGCCAAGAAATCAGTTGAACCGGCATCTGATAAGCCAGGGATGGGACCAATTTTACTGAATCAGGCGACAGATCTGATGTCATCTGGGGATAATCCGCAGAAGGCTCTTGAATTAGCTCTTCGAGCCACAAAAGTTTTTGAGAAGTGTGCTAGTGAGAAACCAAGTTTGGAGCTTGTTATGAGTTTACATGTTGCAGCAGCAATACATTGTAGCTTGGGTCAATACAATGAAGCGATTCCAATTCTTGAGCGCTCAATTGAGATTCCTGTTATTGAGGAAGGCCCAGAGCATGCCCTTGGTAAATTTGCTGGTCTTATGCAACTGGGTGACACCTATACAATGCTGGGCCAGCTTGAGAATTCAATTATGTGCTACACCAATGGTTTGGATATCCAGAGACAGGTTTTGGGAGAAACAGATCCAAGAGTCGGTGAAACTTGTCGGTATCTAGCTGAAGCACATGTTCAAGCATTGCAATTTGATGAGGCTGAGAGGCTCTGCCAAATGGCTCTGGATACTCATAGAGCAAATGATTCACCCCCTTCTCTTGAAGAGGCAGCAGATAGGAGGCTCATGGGCCTTATATGTGAAACAAAGGGAAAGCATGAAGCAGCTTTAGAGCATCTTGTTTTAGCAAGCATGGCAATGGTAGCGAATGGCCAGGAAGTGGAAGTGGCATCTGTTGACTGCAGCATTGGAGATACTTACTTATCCTTGGCTCGATATGATGAGGCTGTTTTTGCTTATCAGAAAGCACTTGCAGTTTTCAAGGCCAGCAAAGGAGAGAATCATCCAGCTGTGGGTTTTGTTTTTGTACGTCTAGCTGACTTGTATAAGAGGACAGGGAAGATAAAGGAATCCAAATCTTACTGCGAGAGTGCACTTAGAATCTATGAGAAACCTCTTCCAGGTGTCCCCCCTGAGGATATTGCAAGTGGTTTTACCGATCTTGCAGCTATCTATGAGTCGATGAATGAGCATGAACAGGCACTTAATTTGCTGCAAAAGGCATTGGGTTTATATAACAATGCCCCTGGTCAGCAAAGCACAATAGCAGGAATTGAAGCCCAGATGGGAGTCTTGTACTACATCTTGGGGGACTATACTGAATCTTATAACACTTTCAAGAAAGCTATTTCAAAGCTTCGCGCCATTGGAGAGAAGAAATCAGCCTTCTTTGGTATTGCTCTTAATCAAATGGGTCTTTCCTGTGTGCAGCGTTACGCGCTAAGTGAGGCTGCAGAATTGTTTGAAGAGGCAAAGAATATTTTGGAACAGGAGTATGGACCATATCACCCTGAGACTCTTGGCGTATATAGCAACCTTGCTGGCACATATGATGCAATTGGCAGGCTGGATGATGCAATTGAAATTCTGGAGTATGTCGTTGGTTTAAGGGAGGAAAAACTCGGGACAGCGAATCCTGATGTTTATGATGAGAAGAGAAGGTTGAGTGAGTTGTTGAAGGAAGCAGGTAGGGTTCGGTGCAGAAAATCCATGTCACTTGAGCACCTTCTTGATGCCAATGCTGGTGCTCTAAATAATCTTTTCATAAGGATGGCTAGCTAG 2211 0.436 MPGIVANGVNDEGGANERNVNPSPSKETSTPVDSQNPGSASPEICADGAVDTSIEQLYENVYEMQSSDQSPSRQSYGSDGDESRIDSELRHLVGGPMREVEIMEEEMEENPGGDGSSEKSSRKGSSSNDRKLEKVDEIQPASTSSNSSEKSNKASNSKLQPKTSVKSKPKVKSPPAKPPIERKNDKPLSKQNTGNISVKKSQNSPSGKSVSLSHAKKSVEPASDKPGMGPILLNQATDLMSSGDNPQKALELALRATKVFEKCASEKPSLELVMSLHVAAAIHCSLGQYNEAIPILERSIEIPVIEEGPEHALGKFAGLMQLGDTYTMLGQLENSIMCYTNGLDIQRQVLGETDPRVGETCRYLAEAHVQALQFDEAERLCQMALDTHRANDSPPSLEEAADRRLMGLICETKGKHEAALEHLVLASMAMVANGQEVEVASVDCSIGDTYLSLARYDEAVFAYQKALAVFKASKGENHPAVGFVFVRLADLYKRTGKIKESKSYCESALRIYEKPLPGVPPEDIASGFTDLAAIYESMNEHEQALNLLQKALGLYNNAPGQQSTIAGIEAQMGVLYYILGDYTESYNTFKKAISKLRAIGEKKSAFFGIALNQMGLSCVQRYALSEAAELFEEAKNILEQEYGPYHPETLGVYSNLAGTYDAIGRLDDAIEILEYVVGLREEKLGTANPDVYDEKRRLSELLKEAGRVRCRKSMSLEHLLDANAGALNNLFIRMAS 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0791 736 ProSiteProfiles TPR repeat profile. 525 558 IPR019734 GO:0005515
Dere03g0791 736 Coils Coil 531 558 - -
Dere03g0791 736 ProSiteProfiles TPR repeat profile. 440 473 IPR019734 GO:0005515
Dere03g0791 736 MobiDBLite consensus disorder prediction 14 41 - -
Dere03g0791 736 Gene3D Tetratricopeptide repeat domain 317 426 IPR011990 GO:0005515
Dere03g0791 736 Pfam Tetratricopeptide repeat 320 388 - -
Dere03g0791 736 Pfam Tetratricopeptide repeat 609 674 - -
Dere03g0791 736 Pfam Tetratricopeptide repeat 439 514 - -
Dere03g0791 736 SMART tpr_5 566 599 IPR019734 GO:0005515
Dere03g0791 736 SMART tpr_5 482 515 IPR019734 GO:0005515
Dere03g0791 736 SMART tpr_5 525 558 IPR019734 GO:0005515
Dere03g0791 736 SMART tpr_5 316 349 IPR019734 GO:0005515
Dere03g0791 736 SMART tpr_5 608 641 IPR019734 GO:0005515
Dere03g0791 736 SMART tpr_5 273 306 IPR019734 GO:0005515
Dere03g0791 736 SMART tpr_5 650 683 IPR019734 GO:0005515
Dere03g0791 736 SMART tpr_5 358 391 IPR019734 GO:0005515
Dere03g0791 736 SMART tpr_5 440 473 IPR019734 GO:0005515
Dere03g0791 736 Gene3D Tetratricopeptide repeat domain 230 316 IPR011990 GO:0005515
Dere03g0791 736 MobiDBLite consensus disorder prediction 79 101 - -
Dere03g0791 736 MobiDBLite consensus disorder prediction 138 167 - -
Dere03g0791 736 Pfam Tetratricopeptide repeat 529 558 - -
Dere03g0791 736 Gene3D Tetratricopeptide repeat domain 427 601 IPR011990 GO:0005515
Dere03g0791 736 MobiDBLite consensus disorder prediction 189 213 - -
Dere03g0791 736 Gene3D Tetratricopeptide repeat domain 602 716 IPR011990 GO:0005515
Dere03g0791 736 Pfam Tetratricopeptide repeat 276 309 IPR019734 GO:0005515
Dere03g0791 736 SUPERFAMILY TPR-like 485 678 IPR011990 GO:0005515
Dere03g0791 736 SUPERFAMILY TPR-like 359 516 IPR011990 GO:0005515
Dere03g0791 736 MobiDBLite consensus disorder prediction 123 137 - -
Dere03g0791 736 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 36 723 - -
Dere03g0791 736 SUPERFAMILY TPR-like 242 391 IPR011990 GO:0005515
Dere03g0791 736 MobiDBLite consensus disorder prediction 58 78 - -
Dere03g0791 736 MobiDBLite consensus disorder prediction 1 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0791 Dere-ChrDere03 12462740 12465406 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0791 03 12462740 12465406 Dere14g0565 14 5754817 5764960 CCT
Dere03g0791 03 12462740 12465406 Dere14g0565 14 5754817 5764960 ECH
Dere03g0791 03 12462740 12465406 Dere03g0791 03 12462740 12465406 ECH