Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2830 ATGGACGAAAGAAGATTGAATATTGAAGCCCCTCTTCTGTCTGTTAGACGTTCTACTACATTGCCATCCTTAACCGAAGGCAAGAGGAAAACATTGGAGAAGAGGCACACTCTTCCATACCCTAAATCAGACTTGACTATGCATAAATTCACAGAACCTATTACAGTTCCTTTCAATTGGGAGCATATCCCCGGAAGATCCAAGGGCAAGGAGACTCCAATTACTCCAACGCCAAGGCTTGACGAAGGAACAAAAGATGAGAAGACATCGTCAAATGGGGAAGATGATGCTGTTTATTCTGATGCCCTTGATACAATGTCGCCCTCAACATCCTTCTGCATGAACTGCAGTGTAAGCGGTATAAGTGGGTTAGAATTAGATAATGTGAATGCAAACTCTGGAACCTTTAACATGGATAACAAAACTAGAGACTTCATGATGAACCGATTCTTACCTGCAGCGAAAGCAATGACTTTACAGACTCCTCAACATGCTTCGAGGAAGCAAACTGTGGCTGTAGAACAACTTAGAGAAGTTAACAGATCGATTCGTGAGGAGAAGAAGCTTCTGCTTAAGAAACATATCTCTGACATTATACAAAGTTCTAGCCAATGTCAAGCTGAAGAAGAAAGTCAAGATGAAGTTGATAACTATCATGACTCTGCAAATGTTTCAGCTAAAGGTTGTGGTCTGTTTCCCCAATTGCGCATTAAGAATTCGCTGTGCTCGTTAAATCCTGTGCCTGGCATGAAAATGAGGGTTCAGAACCAAGTTACCATGTTTTCTTCAGCGAATGAGGTTGGGAAACCAAACAAAGGCTCTCATGTTCGATCTTATAGCCCAGCTCCTGCAGTAAAAAAGGCTATTGATGCCATTTATAAGAACAAATCAAGCTCTGAAGCTGCATTGCCGGACATAGGGGAGGTAAGGAAGAAGTGGATTAGTCAATCATGCCGGTTTACTGGTGAATCTCAGCAACAAGGTAGGCTATCTCCATTCCGGCGTTCAAGAGCTGCTGCTGCTGGTGTATCTCCCTGCCGAAGTAGACCTCAATATCCTCTTCGTGGAACAAGATTGCTTTGTGATTCTAGAGAAGCTGAGAATATTAGTCAATCTAACAGAATGAATTTCCAGAGCAGAGGCAATGGCAACATTCAGGACAATAATTTAGCAGTTGAGAAGACATTATACATTGATTCTGCCAGTACAGCGGAACTATCATCTTCTTCACATTCATATTCTCTAGAAACCTCTCAAGCTGTGAAAAAACTGCAAGCTTTGGAAGAAAAGAACATGTTGGATTCAGATACAAACAACACCAAGGAAATTGTAGTAGCTGATGATGATTTAGGAAATGGGGTTAGTGTATCTGTTCTGTGTCCTCTTCCCCCACCATTACCAAAATCACCTTCTGAGTCATGGCTGTGGCGTGCCCTGCCTTTGGTTTCAGTAAGGAACCCACTGCATCATTCAAATTTAGGCAGTTATTCCCAATGTAAAAGCAGGGACTTTTACACAACATCCAGCAATAATACCAAGTGGCAAACAATAGTAAAAACTTCGAATTTGCGCGATGATCATGTGCGCTATTCTCAGGAACTAATAACCACTCACATGCCTCAGGGTTTAAAATCCTAG 1638 0.4194 MDERRLNIEAPLLSVRRSTTLPSLTEGKRKTLEKRHTLPYPKSDLTMHKFTEPITVPFNWEHIPGRSKGKETPITPTPRLDEGTKDEKTSSNGEDDAVYSDALDTMSPSTSFCMNCSVSGISGLELDNVNANSGTFNMDNKTRDFMMNRFLPAAKAMTLQTPQHASRKQTVAVEQLREVNRSIREEKKLLLKKHISDIIQSSSQCQAEEESQDEVDNYHDSANVSAKGCGLFPQLRIKNSLCSLNPVPGMKMRVQNQVTMFSSANEVGKPNKGSHVRSYSPAPAVKKAIDAIYKNKSSSEAALPDIGEVRKKWISQSCRFTGESQQQGRLSPFRRSRAAAAGVSPCRSRPQYPLRGTRLLCDSREAENISQSNRMNFQSRGNGNIQDNNLAVEKTLYIDSASTAELSSSSHSYSLETSQAVKKLQALEEKNMLDSDTNNTKEIVVADDDLGNGVSVSVLCPLPPPLPKSPSESWLWRALPLVSVRNPLHHSNLGSYSQCKSRDFYTTSSNNTKWQTIVKTSNLRDDHVRYSQELITTHMPQGLKS 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2830 545 Pfam Protein of unknown function (DUF688) 1 413 IPR007789 -
Dere02g2830 545 MobiDBLite consensus disorder prediction 59 98 - -
Dere02g2830 545 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 1 535 - -
Dere02g2830 545 Coils Coil 173 193 - -
Dere02g2830 545 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2830 Dere-ChrDere02 31867785 31869678 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g3396 02 43134856 43144770 Dere02g2830 02 31867785 31869678 CCT
Dere02g2830 02 31867785 31869678 Dere02g2830 02 31867785 31869678 ECH
Dere02g2830 02 31867785 31869678 Dere07g0239 07 4721748 4723818 ECH