Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2611 ATGCGTTTGCATGCCAAAGTTTTGCGAGACGTTGCGAAGCCAGCATGTGACGTGTTCATAAACCATCGTGGGGTTGATACCAAAAGAACAGTGGTTCGCTTGCTCTACGACCATCTCATGCAGCATGGAGCGAAGCCCTTCTTGGACGCAACAAATCTGAAACCAGGAGACAGATTGTTCGACAACATTGACAAGGCCATACGAGGTTGTAAGGTTGGGGTTGCTGTCTTTTCACCTCGTTATTGCGACTCTTACTTCTGTCTCCATGAGCTTTCTCTTCTTGTGGAGTCTAGGAAGCGAATCATCCCCATTTTCTACGACGTGAAGCCATCGCAGCTTCAGGTTAAGGGCTATGCGAGTTGTTCCCTGAAAGATCTGCATAGGTTTAGTTTGGCCATTGAAGAAGCTAAGTGCACTGTGGGACTACCCTATGACTCCTCTAAAGGGGACTGGTCGGAGCTGGTAAGGAAAGCTTCAGATGCAGTGATAAGGAATTTGCATGAGGTAGAGGAAGATATCAGCGCATGA 528 0.4773 MRLHAKVLRDVAKPACDVFINHRGVDTKRTVVRLLYDHLMQHGAKPFLDATNLKPGDRLFDNIDKAIRGCKVGVAVFSPRYCDSYFCLHELSLLVESRKRIIPIFYDVKPSQLQVKGYASCSLKDLHRFSLAIEEAKCTVGLPYDSSKGDWSELVRKASDAVIRNLHEVEEDISA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2611 175 SMART till_3 15 161 IPR000157 GO:0007165
Dere02g2611 175 Gene3D - 8 135 IPR035897 -
Dere02g2611 175 ProSiteProfiles TIR domain profile. 14 137 IPR000157 GO:0007165
Dere02g2611 175 Pfam TIR domain 17 128 IPR000157 GO:0007165
Dere02g2611 175 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 113 IPR035897 -
Dere02g2611 175 PANTHER COP1-INTERACTING PROTEIN-RELATED 16 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2611 Dere-ChrDere02 29061067 29062178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2611 11 172 Miscellaneous Gene Families AT1G57670 26.136 4.22e-15 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2611 02 29061067 29062178 Dere02g2610 02 29005144 29005875 CCT