Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1839 ATGGCAGCCTCATCCTCTTTCAGCAATTTTCTCTCTTTTATCTTACCCTCAAAACCACCACCTCCCAAGACACCACCACCTTCCCAATTGAATCTTCCTTCTTCATCTTCTCGCTTCCCCTCTCAGACTCACCAGAAGTTGCCGGACAATTTTGCGCCGCTGGTTTCTGAAGATGATGGCAAGCACAATTCTCGTTTATCGGCTGAGTTATCCTCTGTGATATGCCCCTCTCTGGCTTATGCCAACACTCTGTTCTTTAAATCAGCGTACAATGTACAGGTGCTTGTGGGGGAGAACGAGTCTGAGGAAAGGCTGCTCAACAGGTTTCGTAGAGAGGTCATGAAGACCGGTCTCATTCAGGAATGCAAGAGGAGGAGGTTTTTTGAGAACAAGCAGGACGAGAAGAAGCGCAAGTCCCGCGAGGCTGCCAAGCGCAACCGCAGAAGGCCGCGTGCCCAGTCAAGATTTTCAACAGAGAATAGGCTGGAAGTCCCAACAACAACCAAGAAGGAAGAGGAGGAGGATAACTGGGATCTGCCTGAAGACACTCCATACTGA 558 0.4964 MAASSSFSNFLSFILPSKPPPPKTPPPSQLNLPSSSSRFPSQTHQKLPDNFAPLVSEDDGKHNSRLSAELSSVICPSLAYANTLFFKSAYNVQVLVGENESEERLLNRFRREVMKTGLIQECKRRRFFENKQDEKKRKSREAAKRNRRRPRAQSRFSTENRLEVPTTTKKEEEEDNWDLPEDTPY 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1839 185 NCBIfam 30S ribosomal protein S21 92 149 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere02g1839 185 PRINTS Ribosomal protein S21 family signature 127 137 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere02g1839 185 PRINTS Ribosomal protein S21 family signature 95 103 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere02g1839 185 PRINTS Ribosomal protein S21 family signature 115 125 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere02g1839 185 PRINTS Ribosomal protein S21 family signature 103 112 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere02g1839 185 MobiDBLite consensus disorder prediction 16 62 - -
Dere02g1839 185 Pfam Ribosomal protein S21 93 147 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere02g1839 185 Hamap 30S ribosomal protein S21 [rpsU]. 91 147 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere02g1839 185 Gene3D Ribosomal protein S8 106 144 IPR038380 -
Dere02g1839 185 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 1 183 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere02g1839 185 MobiDBLite consensus disorder prediction 130 185 - -
Dere02g1839 185 MobiDBLite consensus disorder prediction 30 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1839 Dere-ChrDere02 18155374 18156518 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g1971 01 33878714 33879737 Dere02g1839 02 18155374 18156518 CCT