Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1971 ATGGCTGCCTCCCTCTCCAACTATCTCTCTTCCATCTTAACCCCACCAAAGACTCCTCCACAACCATCGCCACCTCAACAGTTCAATCTCCCTTCTTCATCGACTCGGTTTCCGTCTCAGACCCAGAAATGTGGCGACAATTTGGTGCCACTGGTTGCCCAGCATGATGATCACTCCTCTTCGTCCTCGTCTTTATCGGCAGAGTTATCCTCTGTGATGTGCCCATCTCTCGCTTATGCGAACACCCTCTTCTTCAAATCGGCGTACAATGTGCAGGTGGTGGTGGAAGACAACGAGCCAGAGGAGAGGCTGCTCAACAGGTTCCGAAGAGAGGTCATGAAGGCCGGTGTCATTCAAGAATGTAAAAGGAGGAGGTTCTTCGAGAATAAACAGGATGAGAAGAAGCGCAAGTCACGTGAGGCTGCCAAGCGTAATCGCAAAAGGCGCCCCATGTCAAGATCTTCAGTACAGACCAAGCCAGATGTCCCAAAAACAAAAGAAGAGGATGATGACAATTGGGATCTACCTGAAGAAAACATTCCATATTGA 549 0.4936 MAASLSNYLSSILTPPKTPPQPSPPQQFNLPSSSTRFPSQTQKCGDNLVPLVAQHDDHSSSSSSLSAELSSVMCPSLAYANTLFFKSAYNVQVVVEDNEPEERLLNRFRREVMKAGVIQECKRRRFFENKQDEKKRKSREAAKRNRKRRPMSRSSVQTKPDVPKTKEEDDDNWDLPEENIPY 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1971 182 Gene3D Ribosomal protein S8 105 143 IPR038380 -
Dere01g1971 182 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 1 182 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere01g1971 182 MobiDBLite consensus disorder prediction 1 43 - -
Dere01g1971 182 Hamap 30S ribosomal protein S21 [rpsU]. 90 146 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere01g1971 182 MobiDBLite consensus disorder prediction 28 43 - -
Dere01g1971 182 PRINTS Ribosomal protein S21 family signature 102 111 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere01g1971 182 PRINTS Ribosomal protein S21 family signature 126 136 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere01g1971 182 PRINTS Ribosomal protein S21 family signature 114 124 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere01g1971 182 PRINTS Ribosomal protein S21 family signature 94 102 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere01g1971 182 NCBIfam 30S ribosomal protein S21 91 148 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dere01g1971 182 MobiDBLite consensus disorder prediction 129 182 - -
Dere01g1971 182 Pfam Ribosomal protein S21 92 146 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1971 Dere-ChrDere01 33878714 33879737 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g1971 01 33878714 33879737 Dere02g1839 02 18155374 18156518 CCT