Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1698 ATGGGTGCAAGTCGAAAACTTCAGGGAGAGATTGATCGTGTTTTGAAGAAGGTCCAAGAAGGCGTTGAAGTCTTCGATAGTATCTGGAATAAGGTTTACGATACTGAGAATGCGAACCAGAAGGAAAAATTTGAAGCAGACCTGAAGAAGGAGATTAAGAAGCTTCAGAGGTACAGAGACCAGATTAAGACTTGGATTCAGTCGAGCGAGATCAAGGATAAGAAGGTTAGTGCCTCTTATGAGCAGGCCCTAGTGGATGCTCGCAAGCTCATTGAGCGTGAAATGGAAAGATTTAAGATCTGTGAGAAGGAGACTAAGACCAAAGCCTTCTCCAAAGAAGGCCTGGTCCAACAGCCCAAAACCGATCCTAAGGAGAAGGCTAGGTCAGAGACAAGGGATTGGTTAAACAATGTGGTTGGGGAGTTGGAATCTCAGATTGATAACTTTGAAGCTGAGGTTGAAGGGCTTTCTGTCAAAAAAGGGAAGAATAGGCCGCCCAGATTGACACATCTAGAGACATCAATTACTCGACACAAGGCTCATATACAGAAATGTGAATTACTTTTGAGGCTGCTTGATAATGATGAGTTAAGTCCTGAGCAGGTTAATGATGTCAAAGATTTCTTGGAGGACTATGTGGAGCGTAACCAGGAGGATTTTGATGAATTCAGTGATGTTGATGAGCTATACAGTTCATTACCTCTAGACAAGGTGGAGTCTCTTGAAGACCTTGTTACAATTGGTCCCCCTGGTATTGCTAAGGGTGCACCTACTCTTAGCTTGAAGAACTCGTTGGCAGCATCAGCACTAGCATCAGCATCGGCATCTCAGGCATCTGAGCAAGCTGATGATACAGCTTCTCAGGATAGCAATTCTGATATTGTCACAAGAACTCCACCTTCTAAAAGTATTGGAATTAATTCTGCTACTTCAACACCAGCTGGGAACCATACTGCTCCTGTTTCTATGAATGTTTCAGCTCATAACATGTTGGGAGCACCAGCTCTTACATCAGTCCTCCCTGGTTCAAATCCTGTTCAGAGTACCTTGGAAATTCCTAGTGCTGCCAATTCTTCATCATCTGTAAATCAGTCTAGCTCTATAAAGGAAGAAGAAGTGAATAGCTTCCCTGGACGGAGACCATCTCCTTCACTTTCTGAAGCTGCACTTGTGAGGGGCATTGGCAGAAACGGCCTGTCGAATCAAGCATCCTCTAGTATCCCTCTTGGTTCAGGCAACATTGTTTCCAGCCATGGGGCCCTTGGTTCAGTCCCTTCAGCCTCTGAAATAACAAGGAGAAACATATTGGGTGCTGATGATAGACTTGGAAGTAGTGGCATGGTGCGGCCTCTTGTATCTACCCTTGGTAACAGAACCATCTTGCCTCAGGCTGCAAAGGGTAATGACGTAACTTCTTCAATTGAAACTGGTAATGTCAATGAGGCTGCAGCTGTATCTGGGAGAATTTTTTCTCCTCCAGTGGATCCTGGCATGCAATGGAGATCTGGAAGCCCCTTCCAGAACCAGAATGAGATGGGGCAGCTTCGTGGAAGAACTGAAATAGCTCCTGATCAAAGAGAGAAATTTTTGCAGAAGTTTCAGCAAGTTCAACAACAAGGGCACAGTACCCTTCTTGGTATGCCTTCTGTTGCTGGAGGAAATCATAGGCAATTTTCTGCTCAGCAGCAAAACCCTCTATTGCAGCAATTTAGCTCACAAGGTTTGTCTGTTTCCTCCGAATCTGGTCTGGGACTTGGAGTCCAGGCACCAGGTTTCAGTAGTATTTCATCTACCTCATTACAGCTGACACCTAGTTCTATCAATTTCCCATCTAACCAGCAGCAGTTGATGTCAGGTGTTTCTAAAGATGTTGATGTTGGCAATTCTATGGTTGAAGAACAGAAGCAACAGCATAATTTTCCTGATGAGGGAGCGAATGAATCTACTACTAGTACTGGGCTTGGCAATAATCTTATAAACAAAGATGATTTGAAATCCACATATGCTGTAGATACTCTTGTGCAGGCAGGATTATCTGACTCTCTCCCAGAGCCTGCTCAGACTTTCAGGGATACTGACTTGTCTCCTGGCCAACCTTTACAATCTGATCAATCTTCTGGGAACCTTGGTGTCATTGGAAGGAGAAGTGGTGCTGACCTTGGAGCCGTTGGTGATAACTTTAGTGGATCAAGTGTTAATTCTGGTGGAATGCATGATCAGTTATATAATTTGCAGATGCTTGAGGCAGTTTACTACAAACTTCCACAACCTAAAGATTCAGAACGTCCAAGGACTTATACCCCTAAGCATCCAACAATAACACCTACTAGCTATCCTCAAGTGCAGGCACCCATTGTTAATAATCCTGCCTTTTGGGAGAGAGTTGGTCTCGAACCTTATGGAACTGATTCCTTGTTCTTTGCATTCTATTATCAGCAGAACACATATCAACAATATTTGGCTGCAAAAGAGCTAAAGAAGCAGTCTTGGAGATATCACAGAAAATATAACACTTGGTTTCAGCGACATGAAGAGCCAAAAGTTGCTACAGATGAATATGAGCGGGGAACATATGTATACTTTGACTTCCATATCACAAATGATGACCTGCAACATGGGTGGTGTCAAAGAATCAAGACTGAGTTCACTTTTGAGTATAATTATCTTGAAGATGAGCTTATTATATAG 2688 0.4338 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLVQQPKTDPKEKARSETRDWLNNVVGELESQIDNFEAEVEGLSVKKGKNRPPRLTHLETSITRHKAHIQKCELLLRLLDNDELSPEQVNDVKDFLEDYVERNQEDFDEFSDVDELYSSLPLDKVESLEDLVTIGPPGIAKGAPTLSLKNSLAASALASASASQASEQADDTASQDSNSDIVTRTPPSKSIGINSATSTPAGNHTAPVSMNVSAHNMLGAPALTSVLPGSNPVQSTLEIPSAANSSSSVNQSSSIKEEEVNSFPGRRPSPSLSEAALVRGIGRNGLSNQASSSIPLGSGNIVSSHGALGSVPSASEITRRNILGADDRLGSSGMVRPLVSTLGNRTILPQAAKGNDVTSSIETGNVNEAAAVSGRIFSPPVDPGMQWRSGSPFQNQNEMGQLRGRTEIAPDQREKFLQKFQQVQQQGHSTLLGMPSVAGGNHRQFSAQQQNPLLQQFSSQGLSVSSESGLGLGVQAPGFSSISSTSLQLTPSSINFPSNQQQLMSGVSKDVDVGNSMVEEQKQQHNFPDEGANESTTSTGLGNNLINKDDLKSTYAVDTLVQAGLSDSLPEPAQTFRDTDLSPGQPLQSDQSSGNLGVIGRRSGADLGAVGDNFSGSSVNSGGMHDQLYNLQMLEAVYYKLPQPKDSERPRTYTPKHPTITPTSYPQVQAPIVNNPAFWERVGLEPYGTDSLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYERGTYVYFDFHITNDDLQHGWCQRIKTEFTFEYNYLEDELII 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1698 895 Coils Coil 41 61 - -
Dere02g1698 895 Coils Coil 132 159 - -
Dere02g1698 895 MobiDBLite consensus disorder prediction 757 780 - -
Dere02g1698 895 Pfam NOT2 / NOT3 / NOT5 family 751 889 IPR007282 GO:0006355
Dere02g1698 895 MobiDBLite consensus disorder prediction 276 321 - -
Dere02g1698 895 FunFam CCR4-NOT transcription complex subunit 3 isoform X1 735 890 - -
Dere02g1698 895 MobiDBLite consensus disorder prediction 679 708 - -
Dere02g1698 895 Gene3D - 734 890 IPR038635 -
Dere02g1698 895 MobiDBLite consensus disorder prediction 350 372 - -
Dere02g1698 895 MobiDBLite consensus disorder prediction 634 660 - -
Dere02g1698 895 PIRSF NOT_su_3_5 1 895 IPR012270 GO:0006355|GO:0030015
Dere02g1698 895 PANTHER CCR4 NOT-RELATED 24 892 IPR040168 GO:0030015
Dere02g1698 895 MobiDBLite consensus disorder prediction 350 384 - -
Dere02g1698 895 MobiDBLite consensus disorder prediction 681 708 - -
Dere02g1698 895 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1698 Dere-ChrDere02 16875919 16889793 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2122 01 35156275 35165073 Dere02g1698 02 16875919 16889793 CCT