Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1697 ATGGAAAAGATGTGGATTTTGATATGGTTGTTGCTGGTTTGGATCATGGGTCGTTACGTTGAAGGTCTTGGTGTGAATTGGGGTACGCAAGCGAGCCATCAGTTACCTTCAGACGCGGTGGTTCAGATGTTGAAGGACAACAGAATTCAAAAGGTAAAACTGTTTGATTCAGCTGATTCCACCATGAGTGCTCTGGCCGGAACGGGGATCGAAGTCATGGTGGCCATTCCTAATAATCAACTTGCTGTGATGAATGACTATGATCGAGCTAAACAGTGGGTTAAAGTGAATGTTACCCGCTACAACTTCAAAGGAGGGGTTAACATCAAGTATGTAGCAGTTGGGAATGAGCCATTTTTGAAATCCTATAATAATTCATTCTTGAATGTCACCTTGCCAGCACTACAGAACATTCAAAATGCCCTTAACGAAGCTGGAGTTGGAGAGTCTATAAAGGCTACAGTGCCATTAAATGCTGATGTGTACGAGTCCCCAGCAAATAACCCTGTTCCTTCTGCAGGAAGATTCAGGGCTGATATAAGTGATCTCATGACACAGATAGTCCAATTCTTGAATAAGAATGGTGCACCATTCACTGTAAACATCTACCCCTTCTTAAGTCTTTATGGCAACGATGATTTCCCTTTCAACTATGCTTTCTTTGATGGGGTTACCAACCCCATAAACGATAATGGGGCTCCATACACGAACGTGTTTGATGCAAACTTTGATACCTTGGTTTCTGCTCTGAAGGCAGTGGGATATGGAGACATGACCATTTTGGTGGGAGAGGTAGGGTGGCCTACCGATGGGGACAAGAATGCCAACGTAGGTAATGCTTTAAGGTTTTACAATGGGCTTCTTCCAAGGCTTGCAGCAAATAAAGGAACACCACTTCGCCCAGGATTTATTGAAGTGTATTTGTTTGGACTTATTGATGAAGATGCCAAGAGCGTTGCTCCTGGTAATTTTGAGCGTCACTGGGGAATATTCAGGTATGATGGACAGCCCAAGTTTCCAATGGATCTTTCTGGTCAGAATCGGAACATATTACTAGTAGGAGCAAAGAATGTGAAATATCTTTCTTCACAGTGGTGCATGTTTAACGCAGATGCCAAGGATCTCAGTAAGCTTGCAGATAATATTAACTATGCTTGTACCTTTGGAGATTGCACTGCACTTGGATATGGGTCTTCTTGTAACAACCTGGATGCTGATGGCAATGCCTCATATGCGTTTAACATGTATTACCAGGTGCAAAATCAGGATGACATGGCCTGCAATTTTCAAGGTTTGGCCAAGCTTACTACACAGAATATTTCAACAGGCACTTGCAATTTTATCATTCAGATTTCATCATCCTCTTCTCTGAGGTCCTCATTGGTAGCTTCCCTATTTATTACATTATTGATGATTTTATTTTTATAG 1428 0.4209 MEKMWILIWLLLVWIMGRYVEGLGVNWGTQASHQLPSDAVVQMLKDNRIQKVKLFDSADSTMSALAGTGIEVMVAIPNNQLAVMNDYDRAKQWVKVNVTRYNFKGGVNIKYVAVGNEPFLKSYNNSFLNVTLPALQNIQNALNEAGVGESIKATVPLNADVYESPANNPVPSAGRFRADISDLMTQIVQFLNKNGAPFTVNIYPFLSLYGNDDFPFNYAFFDGVTNPINDNGAPYTNVFDANFDTLVSALKAVGYGDMTILVGEVGWPTDGDKNANVGNALRFYNGLLPRLAANKGTPLRPGFIEVYLFGLIDEDAKSVAPGNFERHWGIFRYDGQPKFPMDLSGQNRNILLVGAKNVKYLSSQWCMFNADAKDLSKLADNINYACTFGDCTALGYGSSCNNLDADGNASYAFNMYYQVQNQDDMACNFQGLAKLTTQNISTGTCNFIIQISSSSSLRSSLVASLFITLLMILFL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1697 475 Gene3D Glycosidases 22 350 - -
Dere02g1697 475 Gene3D - 359 459 - -
Dere02g1697 475 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Dere02g1697 475 FunFam Glucan endo-1,3-beta-glucosidase 8 360 456 - -
Dere02g1697 475 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Dere02g1697 475 Pfam X8 domain 364 433 IPR012946 -
Dere02g1697 475 FunFam Glucan endo-1,3-beta-glucosidase 5 22 349 - -
Dere02g1697 475 SMART X8_cls 364 447 IPR012946 -
Dere02g1697 475 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 436 IPR044965 GO:0004553|GO:0005975
Dere02g1697 475 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1697 Dere-ChrDere02 16868076 16870873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1697 6 475 Miscellaneous Gene Families AT1G64760 71.702 0.0 701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2123 01 35171126 35173838 Dere02g1697 02 16868076 16870873 CCT