Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2123 ATGGAAAGAACTTTTTTCCTTGGAAACGGTGAGATTATGGGGAAATTTTGGATTTTGAAATGGATTATGGTGGTGGGGATGATGGGTTGGTATGTTGAAGGGCTTGGGGTGAATTGGGGGACTCAGGCAACACACAAATTGCCTCCAGACACGGTGGTGCAGATACTGAAGGACAATGGTATTCAGAAAGTGAAACTCTTTGATGCAGATGAATCCACCATGACTGCTCTGGCTGGGACTTCCATTGAAGTCATGGTTGCCATTCCTAATAACCAGCTTCTTCCCATGAATGACTATGATCGGGCCAAGCAGTGGGTTCGCAAGAATGTCACACGCTACAACTTCAAAGGAGGCGTTAACATCAAGTATGTAGCAGTAGGAAATGAGCCATTTTTGAAATCCTACAATAATTCATTCTTGAACGTCACCTTGCCAGCACTGCAGAACATTCAAAATGCCCTTAATGAAGCTGGCGTTGGAGACTCCATAAAGGCCACGGTGCCCTTAAATGCTGATGTGTATGAATCTCCAACAGATAACCCAGTTCCATCTGCTGGAAGATTCAGGGCTGACATAAGTGATCTCATGACCCAGATAGTCCAATTCCTCAACAAGAATGGTGCACCATTCACTGTAAACATCTACCCCTTCTTAAGCCTTTATGGGAATGACGATTTCCCTTTTGACTATGCCTTCTTCGATGGGGTTGCCAATCCCATAAATGATAATGGGACTCCATACACCAACGTATTTGATGCCAACTTTGACACATTGGTTTCTGCTCTAACTGCTGCAGGGTATGGGAACATGCCCGTTTTGGTAGGAGAGGTAGGGTGGCCTACAGATGGGGACAAGAATGCTAATTCAGGCAATGCTTTAAGATTTTACAATGGCCTTCTTCCTAGGCTTGCAGCTAACAAGGGTACCCCACGCCGTCCTGGATATATAGAAGTTTATCTGTTTGGCCTTATTGATGAGGATGCCAAGAGTATTGCTCCAGGAAACTTTGAGCGTCACTGGGGGATTTTTAGGTATGATGGGCAACCCAAGTTTGCTATGGATCTTTCTGGTCAGAATCAAAACAAGCTTCTTATTGGTGCTCAGAATGTGAAGTATCTTCCCCAGAGGTGGTGTATGTTTAATCCAGATGCTAAAGATCTTACCAAACTTGCAGATAATATAAATTATGCTTGTACCTTTGGAGATTGCACGTCTCTTGGTTATGGCTCTTCATGCAACATGTTGGATGCTAATGGGAATGCCTCGTATGCGTTTAACATGTACTACCAGGTGCAGAATCAGGATGACATGGCCTGCGATTTTCAAGGGTTGGCCAAGCCTTCTACCCAGAATATTTCACAGGGCAATTGCAATTTTATTATTCAGATAGCTCCTTCATCGTCCTCTCCTTTGAGGTCCTCGCTTGTAGCATGCGTTGTGATCACACTATCCGTGATTCTATTTTTGTAG 1470 0.4408 MERTFFLGNGEIMGKFWILKWIMVVGMMGWYVEGLGVNWGTQATHKLPPDTVVQILKDNGIQKVKLFDADESTMTALAGTSIEVMVAIPNNQLLPMNDYDRAKQWVRKNVTRYNFKGGVNIKYVAVGNEPFLKSYNNSFLNVTLPALQNIQNALNEAGVGDSIKATVPLNADVYESPTDNPVPSAGRFRADISDLMTQIVQFLNKNGAPFTVNIYPFLSLYGNDDFPFDYAFFDGVANPINDNGTPYTNVFDANFDTLVSALTAAGYGNMPVLVGEVGWPTDGDKNANSGNALRFYNGLLPRLAANKGTPRRPGYIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFAMDLSGQNQNKLLIGAQNVKYLPQRWCMFNPDAKDLTKLADNINYACTFGDCTSLGYGSSCNMLDANGNASYAFNMYYQVQNQDDMACDFQGLAKPSTQNISQGNCNFIIQIAPSSSSPLRSSLVACVVITLSVILFL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2123 489 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 28 446 IPR044965 GO:0004553|GO:0005975
Dere01g2123 489 SUPERFAMILY (Trans)glycosidases 35 354 IPR017853 -
Dere01g2123 489 SMART X8_cls 376 459 IPR012946 -
Dere01g2123 489 Pfam Glycosyl hydrolases family 17 35 354 IPR000490 GO:0004553|GO:0005975
Dere01g2123 489 FunFam Glucan endo-1,3-beta-glucosidase 5 34 361 - -
Dere01g2123 489 Pfam X8 domain 377 445 IPR012946 -
Dere01g2123 489 ProSitePatterns Glycosyl hydrolases family 17 signature. 270 283 IPR000490 GO:0004553|GO:0005975
Dere01g2123 489 FunFam Glucan endo-1,3-beta-glucosidase 8 372 468 - -
Dere01g2123 489 Gene3D - 372 469 - -
Dere01g2123 489 Gene3D Glycosidases 34 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2123 Dere-ChrDere01 35171126 35173838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2123 18 487 Miscellaneous Gene Families AT1G64760 74.468 0.0 718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2123 01 35171126 35173838 Dere02g1697 02 16868076 16870873 CCT
Dere01g2123 01 35171126 35173838 Dere01g2123 01 35171126 35173838 ECH