Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1532 ATGCTTTACTTTTTAGTATCTTTCATCTCCTTTGTCATCATCCTTTCCAAATCATTTACCAGTAAGCCAATTGTGTTCTGGGAGAACTTATCAAGTTTACTCATTTCTCAGCACCGGAAAGGTGACGTTGCTTTTAGTTTTATTGAGGTTTTTCCAACTATGTCATTGAAGAAGAATAATTCAGTACTTACGCAAGAGGAAGGCAAATTTTCTCTCTTAGATTTGCCTGATTTGACATTGGATTGTATCCTTGAGAAACTTTCACCAGCTGACTTATGCAATATGGCAGTAGTGTGCCCATCTCTTAGGGATAGATGTCGAAGTGACTATTTATGGGAGAAACACATGGGGCGGAAGTGGGGTAAAGTGATTGGTGCTTCTGCTTTTAGGCAATGGCGATGGCATATAGCTTCCAGAAACAGAGAAAAAATCTTCCATCGTCGCGATCAGAAAGGAGTATTTGCTTCCCTTCAAGGTTTTAGTCCCTTTCGATGGATTAAAAATATATCAGGAAATGGCAGACAGTCCAGGAGCTTATTACCAGACGATTCATTCATGACTTTGTATCTTTCTCTTGAGAATGGCAAGTTTTGGTTCCCAGCTCAAGTCTATAACCGAGAGAATGGTCATGCTGGGTTCATGCTCTCATGTTATGATGCCCAGCTACGCTACGACTCTCGAACAGACACCTTTCAGGCCAGGTACTCACCTCATGAGCGATGGTCAATTGAGGGAAATATACATTGGGACAGGTTGAGGATGCCACCCATCGACATTTCTTCTCATGTTCTTCATACCTCTGACTGTTTGGATGACTTAAGACCAGGAGACCACATTGAGATTCAGTGGAGAAGAAATAGAGATTATCCTTATGGTTGGTGGTATGGTGTCATTGGTCACTTGGAATCATGCCAAGGTCATGGGAATCATTGCCATTGTCACAACAGTGACATGGTGGTTTTGGAGTTCAACCAGTATGCCCCTGGATGCCGATGGAGACAAGCAGTGATAAACAGGAAGCACCATACAGAGCAAGGAGATCAAGGAGATGGATTTTATGGGGGATTAAGGAAGCTGCATAATGAGGAGGAGATTACCAGGTGGAGGAATCTTTGGCCAACCATACTTGTGGAATGGCATGATTGA 1146 0.4267 MLYFLVSFISFVIILSKSFTSKPIVFWENLSSLLISQHRKGDVAFSFIEVFPTMSLKKNNSVLTQEEGKFSLLDLPDLTLDCILEKLSPADLCNMAVVCPSLRDRCRSDYLWEKHMGRKWGKVIGASAFRQWRWHIASRNREKIFHRRDQKGVFASLQGFSPFRWIKNISGNGRQSRSLLPDDSFMTLYLSLENGKFWFPAQVYNRENGHAGFMLSCYDAQLRYDSRTDTFQARYSPHERWSIEGNIHWDRLRMPPIDISSHVLHTSDCLDDLRPGDHIEIQWRRNRDYPYGWWYGVIGHLESCQGHGNHCHCHNSDMVVLEFNQYAPGCRWRQAVINRKHHTEQGDQGDGFYGGLRKLHNEEEITRWRNLWPTILVEWHD 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1532 381 PANTHER ESTS AU081301(E20138) 1 375 - -
Dere02g1532 381 SMART fbox_2 75 115 IPR001810 GO:0005515
Dere02g1532 381 Gene3D - 56 148 - -
Dere02g1532 381 ProSiteProfiles F-box domain profile. 69 115 IPR001810 GO:0005515
Dere02g1532 381 Pfam F-box domain 72 114 IPR001810 GO:0005515
Dere02g1532 381 SUPERFAMILY F-box domain 58 123 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1532 Dere-ChrDere02 15013983 15015992 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2340 01 37707484 37709205 Dere02g1532 02 15013983 15015992 CCT
Dere02g1532 02 15013983 15015992 Dere02g1532 02 15013983 15015992 ECH