Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2340 ATGATATCAGTCTCAATCTCTAAACACCTGGTAGAATACATTGTTAGTGACAATGTGGTAGACACAAGGATGGAGGAAAACAAGTGCAGGGTATGTCTGTTGGATTTGCCAAACTCAATCTTGGAACACATTCTGGAATGCCTTTCTCCTTCTGAATTATGCAGAGTAGCAACAGTGTGCACTTTTCTAAGGGACAAATGCAGAAGTGAGCATTTATGGAGGAGAATCATGAAGCAGAAATGGGGGAGATTGATGGGCGATTCTGCTCGCCGAGAATGGCAGAGGTTTGTAGCATTAAGGAAGGCACCACCAAGAAGCAACAGATTGGAGATATCAGAGGCATTTAGTAGTGATTGGCCCATCATAATTACTTGTGGGTCAAATTCAAGCAAGATTTGGCAGTGGAATAATGATTCATTTCCAGATGATTCTGTCATGGATTTGTGTATTTCTCTCGAGATTGGCTTGTTCTGGTTTCCTGCTCAGCTCTATCACGAATATAATGATGGGATGATGACGAACTGGCACGATTCCATGCTAAATTATGACTTCCGGACCGACACTTTCAAAGCAAGGTATCCACTTCATAGGTGGAAGAAATGGGGAGAAAAAATTGGATGGGATAAAGTGAGAGCGCCAGCAGTTGATGTTTCTCCATTTGCTGTTTATGCCTCTGATTGTTTGAATGACTTGAGACCTGGTGATCATATTGAGATCCAATGGAGACATAGACGAGAATACCCTTTTGATATGTTAATTGTGGAGTTCATGGAGTATCCCATTCAGTCGCCTTGGAGAAGGGCTGTGCTGAGCAGAAAGAACTGTGATAAAGAACAAGGGAGCGAAGGGGATGGGTTTTATGGAGGAATAAGAAAGCTTCAAGACCAAGACGAGATAGCAAGGTGGAAGAAGGATATTCTTGCTCTTTGCTATGGTGATTGA 942 0.4246 MISVSISKHLVEYIVSDNVVDTRMEENKCRVCLLDLPNSILEHILECLSPSELCRVATVCTFLRDKCRSEHLWRRIMKQKWGRLMGDSARREWQRFVALRKAPPRSNRLEISEAFSSDWPIIITCGSNSSKIWQWNNDSFPDDSVMDLCISLEIGLFWFPAQLYHEYNDGMMTNWHDSMLNYDFRTDTFKARYPLHRWKKWGEKIGWDKVRAPAVDVSPFAVYASDCLNDLRPGDHIEIQWRHRREYPFDMLIVEFMEYPIQSPWRRAVLSRKNCDKEQGSEGDGFYGGIRKLQDQDEIARWKKDILALCYGD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2340 313 Pfam F-box-like 34 76 IPR001810 GO:0005515
Dere01g2340 313 ProSiteProfiles F-box domain profile. 30 76 IPR001810 GO:0005515
Dere01g2340 313 Gene3D - 18 119 - -
Dere01g2340 313 SMART fbox_2 36 76 IPR001810 GO:0005515
Dere01g2340 313 PANTHER ESTS AU081301(E20138) 250 304 - -
Dere01g2340 313 SUPERFAMILY F-box domain 18 84 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2340 Dere-ChrDere01 37707484 37709205 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2340 01 37707484 37709205 Dere02g1532 02 15013983 15015992 CCT
Dere01g2340 01 37707484 37709205 Dere01g2340 01 37707484 37709205 ECH