Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1388 ATGGGTTGGATTTTGCTTTTTTGGCTTCTAATTTGTTTTCCTCTCAACATTGCCCTTCTCGCTTCAACTTTCTACCAGGTTTTGATCTTAACGGACTTGGAAGCTGACTACGTCAACCCATATGATGCTTCATCTCGGATTAATTACTTCGTCGTTCCTGAGTTTATTGGGCAGGGACTACTTTGCGTTCTCTTCCTCTTCACGGGGCACTGGTTCATGTTTTTGTTAACAGTTCCCCTTACTTGCTATCATGTGATGCTGTATGTGAAACGGCAGCATCTACTTGACGTCACTGAAGTGTTTAGGGTACTTAATGCTGAGAAGAAATATCGGATAATTAAGCTTGTTTTCTACTTATCTCAGCTTCTCGTCACTGTCTTCAGGCTTACATTATTCGTTGTCTACTTTCTAGATCTTGATGATGACTCATAA 432 0.4074 MGWILLFWLLICFPLNIALLASTFYQVLILTDLEADYVNPYDASSRINYFVVPEFIGQGLLCVLFLFTGHWFMFLLTVPLTCYHVMLYVKRQHLLDVTEVFRVLNAEKKYRIIKLVFYLSQLLVTVFRLTLFVVYFLDLDDDS 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1388 143 PANTHER CORNICHON-RELATED 8 135 - -
Dere02g1388 143 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Dere02g1388 143 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1388 Dere-ChrDere02 13408468 13413027 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2477 01 39504205 39509292 Dere02g1388 02 13408468 13413027 CCT
Dere02g1388 02 13408468 13413027 Dere02g1388 02 13408468 13413027 ECH