Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2477 ATGGGTTGGAATTTGTTTTTCTGGCTTATAATTTGTTTTCCTCTGAAAATTGCCCTTCTTGCCTCAACTTTCTACCAGTTTCTGATCTTAACGGACTTGGAAGCTGACTATGTCAACCCATATGAGGCTTCTTCTCGGATTAATTACTTCGTTGTTCCCGAGTTTATTGGACAGGGAGCACTCAGCGCTCTCTTCCTCTTCACTGGACACTGGTTCATGTTCTTGTTAACGGTTCCTGTCACGGGCTATCATGTGATGCTGTATGTAAAACGGCAGCATCTGCTTGATGTCACCGAAGTGTTTAGGGCTCTTAATGTTGAGAAGAAATACCGGATAGCCAAGCTTGCTTTGTATCTTTTGACTCTTGTTGTCATTGTCATCAGGCTTACGTTATATGGTGTCTATTATTTAGGTATTGAGGACACTGACCTGCAAAACTTCTGTGATAGTGGGGCTAGACTCCCAGTTCAATGGGAATGCTTACCAGATCCAACCATGTGGATTCAGGGTACACCAGTTTTAGGTAAATGGTCTGAGGATTCCATTTTCTCATCAAAACAGTTCCCAGTGGACCTTTGGTTGGATTGA 588 0.4286 MGWNLFFWLIICFPLKIALLASTFYQFLILTDLEADYVNPYEASSRINYFVVPEFIGQGALSALFLFTGHWFMFLLTVPVTGYHVMLYVKRQHLLDVTEVFRALNVEKKYRIAKLALYLLTLVVIVIRLTLYGVYYLGIEDTDLQNFCDSGARLPVQWECLPDPTMWIQGTPVLGKWSEDSIFSSKQFPVDLWLD 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2477 195 PANTHER CORNICHON-RELATED 5 127 - -
Dere01g2477 195 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Dere01g2477 195 Pfam Cornichon protein 7 125 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2477 Dere-ChrDere01 39504205 39509292 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2477 01 39504205 39509292 Dere02g1388 02 13408468 13413027 CCT
Dere01g2477 01 39504205 39509292 Dere01g2477 01 39504205 39509292 ECH