Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1318 ATGGCTAAGCTGGCCTCCACTTTCATCATTCCTCTCGCCACCGTCAAAACGAACCGCTTCTCCAGAAACCTCTCTCCGTCATCGTTGGGCCTCCATAAGGAGAAGCTGAGCCACCTTCACTTCTACTTCCACGACGTCGTCAGCGGCCCAAGACCCACCGCCGTCAGAGTGGCGGAGGCCCGTACGACGAACTCTTCCCCAACGGGGTTCGGGGCCGTGGTGATGATGGACGACCCATTGACCTTAGGCCCGGAACCCAGCTCCGAGCCTGTGGGAAAAGTCCAAGGCATTTACGCGTCGGCGTCCCAAGAGGATGCTGGGTATTTGATGGTGCTGAACTTTGCCTTTACGCACGGCAAATATAACGGCAGCACTTTAAGCGTGCTGGGGCGGAACAAGGTGTTAACCGCCGTGAGGGAGATGCCTATTGTCGGAGGGAGTGGCGCTTTCCGGTTAGCACGTGGGTACGCTCAGGCCAAGACTCACACGTTTGATCTCAAAACAGGGGATGCTGTTGTGGAGTACAACGTCTACGTGTTCCATTATTGA 549 0.5628 MAKLASTFIIPLATVKTNRFSRNLSPSSLGLHKEKLSHLHFYFHDVVSGPRPTAVRVAEARTTNSSPTGFGAVVMMDDPLTLGPEPSSEPVGKVQGIYASASQEDAGYLMVLNFAFTHGKYNGSTLSVLGRNKVLTAVREMPIVGGSGAFRLARGYAQAKTHTFDLKTGDAVVEYNVYVFHY 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1318 182 PANTHER NUCLEOPORIN-RELATED 22 178 IPR004265 -
Dere02g1318 182 Pfam Dirigent-like protein 37 180 IPR004265 -
Dere02g1318 182 Gene3D - 23 178 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1318 Dere-ChrDere02 12668254 12668802 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2542 01 40265127 40265717 Dere02g1318 02 12668254 12668802 CCT
Dere02g1318 02 12668254 12668802 Dere02g1318 02 12668254 12668802 ECH