Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2542 ATGGCAAAACCTCGAACTCTCAGAAAGCTCTTCACTTTCTTGATTCCGCTCACTCTCGTTTTCCTCTTCACATCCCTCGCCGACGCCAAACCCGCCCGTTTCTCTCGCACTCTCTCTCCATCTTCCTTGGGCCTCCGCAAGGAGAAGCTGAGCCACCTTCACTTCTACTTCCACGACATCGTGAGCGGCCGGAACCCCTCCGCCGTGAGGGTGGCAGAGGCCGCCATGACCAAGACCTCCTTCACAGGTTTCGGAGCAGTGGTGATGGCGGACGACCCGTTGACTGTTAGGCCGGAGCCGGGCTCGAAGCTCGTGGGCAAAGCCCAAGGAATATACGCGTCGGCGGCCCAAGACGAAACGGGGCTGTTGATGCTGATGAACTTTGCGTTCATGGAAGGAAAGTATAATGGGAGTTATCTGAGTTTGTTGGGACGGAACGAGGTGTTCAACACCATCAGGGAGATGCCGATCGCCGGCGGAAGCGGGGCTTTCCGGTTCGCACGTGGCTACGCTCAGGCCAAGACCCACACCATAGATCTCAAAACAGGAGATGCTGTGGTCGAATACAACGTCTACGTCTTCCATTATTGA 591 0.5618 MAKPRTLRKLFTFLIPLTLVFLFTSLADAKPARFSRTLSPSSLGLRKEKLSHLHFYFHDIVSGRNPSAVRVAEAAMTKTSFTGFGAVVMADDPLTVRPEPGSKLVGKAQGIYASAAQDETGLLMLMNFAFMEGKYNGSYLSLLGRNEVFNTIREMPIAGGSGAFRFARGYAQAKTHTIDLKTGDAVVEYNVYVFHY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2542 196 PANTHER NUCLEOPORIN-RELATED 32 192 IPR004265 -
Dere01g2542 196 Pfam Dirigent-like protein 51 194 IPR004265 -
Dere01g2542 196 Gene3D - 39 191 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2542 Dere-ChrDere01 40265127 40265717 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2542 01 40265127 40265717 Dere02g1318 02 12668254 12668802 CCT
Dere01g2542 01 40265127 40265717 Dere01g2542 01 40265127 40265717 ECH