Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1294 ATGGTTCAGTTTCTGTCAAAGCCCACCACCGCCTTTGCAGCAAAGTACTCTCCTTTGGGCACCTTCGTCGTCGTACTCATCCTCTGCATTCTGGGTTTTTATACCCTGCATTACCCACGCTCTTATTTACCTGCTTCTGCTCCCCCAAGCGCATCTCACTTCCAGCACATTTTCCTTTCCTACGCCTCCAACTCTACCATTTCCTCCTACCTTCGCGCCCTCACCCTACACCCTCATCTCGCCGGAACAAAATCGGCCTCTGATACCACCCGTTATGTCCTCAACCATTTCAAAGACCTAGGACTTCGCACACATACTGTAACCTACAAGAGCCTCCTCTCCTACCCTGTGCACTCCTCCATCTCGGCGAATTTTAGCGACGGGTCCTTCTCGGAGCTTCACTTAACCGAGCCTACTCGGCCTGATCAGGCTAACCAGGAAGTGGTGCCACCTTATCATGCATACTCGCCATCTGGGTCGGCGTACGCGAAGGTGGTGTTTGTAAATTACGGAAGGGAAGAGGACTACCGTGCGCTTGGGATGCTAGGGGTGAACATTAGTGGATGCATAGTAATAGCGAGGAAAGGCGGTGTTTTGACGAGAGGTGCGGTGGTGGAGATGGCGGAGGCTAATGGTGCGGTGGCAGTGCTAATATACGCCGATGGGGACAACTTTAATAGGAAGGGATTTGAGAGAGGGCATGTAATGAGAGGAATAGGGGACCCACTGAGTCCGGGTTGGGGTGGGGTTGATGGAGGCGAGAGCTTGGATTTGGAAGATAGTGAGGTTTTGAAAAGGTTCCCTAAAATTCCATCCATGCCCCTGTCCGCTGAGACGGCTGAGGCCATTTTGTACTCGCTTGGAGGGGCGCCGGTGCCCCAGGAGTGGAGGAGCACCCTGCGGTCCATGGTCAGGCATGTTGGTCCTGGCCCTACACTTCTCAATTTTACTTACCAGGGGGAGAAAAAGGTGGCTACCATTCACAATGTCTTTGCCATCATAAAGGGATCGGAGGAACCTGACCGCTATGTACTGGTTGGGAACCACAGAGATGCATGGACATATGGTGCTGTTGATCCCAGCAGTGGGACTGCAGCTCTACTTGACATTGCTCGTCGATATTCACTTCTATTGCGTTTGGGATGGACTCCACGGAGGACAATCATTCTATGCAGTTGGGATGCAGAGGAGTTCGGAATGATAGGATCCACTGAGTGGGTTGAACAAAACCTAGTCAATCTGGGTTTCAAAGCTGTAGCTTACCTTAATGTGGACTGTGCTGTTCAAGGGCGTGGTTTCTTTGCTGGCTCAACTCCTCAGCTAGACAATCTTCTTCTTGAGGTCACAAAACAGGTCAAGGATCCTGACTCCGAGGGGGAAACAGTATATGATAATTGGCCAGCCACTGGTGGATATGATAACATTCAAAGACTAAGTGGAGTTGATTCTGATTTTGCTCCATTTGTGCAACATGCAGGGATTCCATCTATTGATGTTTATTATGGAAGAGATTTTCCAGTCTATCACACTGCTTTTGACTCCTACAATTGGATGGCGGAGTATGGAGATCCGTTATTTCAGCGCCATGTAGCTGTTGCTGGAGTTTGGGGACTTTTAGCCCTTCACCTGGCTGATGATTCCGTCCTTCCTTTCAATTACCTTCCTTATGCAGATCAGTTACAGATGTACAAGAACATATTGAGCAACTTGTTAGACCAACGAATCTCTCTACTTTCATTATCAATGTCAATAGAAGAATTTACTTCTGCTGCCAAGCATGCTGATGATGAATCAAAGAAACTGAGATTGCAAGATGAAGCAGATTGCTTGGTTACCATGAAAAGGCGAGCATTGAACGATAGACTAATGCTTGCTGAAAAAGGCTTTCTGGATGCTGATGGACTTCGTGGAAGGCAGTGGTTCAAGCATCTTGTGTTTGGGCCTGCCGGCAACCATGAAAGCAAGCTGAATTTCTTCCCTGGTATTGCTGATGCTATTACTTTATCAACTAGAATGAGTGAAAAAGAAGGGTTGGCAGCAATTCAGCATGAGATCTGGAGGGTTACTAGAGCCATTCAAAGAGCAGCTTCTGCACTGAGAGGAGAATGCACCTAA 2115 0.4846 MVQFLSKPTTAFAAKYSPLGTFVVVLILCILGFYTLHYPRSYLPASAPPSASHFQHIFLSYASNSTISSYLRALTLHPHLAGTKSASDTTRYVLNHFKDLGLRTHTVTYKSLLSYPVHSSISANFSDGSFSELHLTEPTRPDQANQEVVPPYHAYSPSGSAYAKVVFVNYGREEDYRALGMLGVNISGCIVIARKGGVLTRGAVVEMAEANGAVAVLIYADGDNFNRKGFERGHVMRGIGDPLSPGWGGVDGGESLDLEDSEVLKRFPKIPSMPLSAETAEAILYSLGGAPVPQEWRSTLRSMVRHVGPGPTLLNFTYQGEKKVATIHNVFAIIKGSEEPDRYVLVGNHRDAWTYGAVDPSSGTAALLDIARRYSLLLRLGWTPRRTIILCSWDAEEFGMIGSTEWVEQNLVNLGFKAVAYLNVDCAVQGRGFFAGSTPQLDNLLLEVTKQVKDPDSEGETVYDNWPATGGYDNIQRLSGVDSDFAPFVQHAGIPSIDVYYGRDFPVYHTAFDSYNWMAEYGDPLFQRHVAVAGVWGLLALHLADDSVLPFNYLPYADQLQMYKNILSNLLDQRISLLSLSMSIEEFTSAAKHADDESKKLRLQDEADCLVTMKRRALNDRLMLAEKGFLDADGLRGRQWFKHLVFGPAGNHESKLNFFPGIADAITLSTRMSEKEGLAAIQHEIWRVTRAIQRAASALRGECT 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1294 704 Gene3D - 119 320 - -
Dere02g1294 704 CDD M28_PSMA_like 325 551 - -
Dere02g1294 704 SUPERFAMILY Zn-dependent exopeptidases 61 548 - -
Dere02g1294 704 Gene3D - 554 704 IPR036757 -
Dere02g1294 704 FunFam Os01g0740650 protein 320 550 - -
Dere02g1294 704 SUPERFAMILY PA domain 112 331 IPR046450 -
Dere02g1294 704 FunFam N-acetylated-alpha-linked acidic dipeptidase 2 551 702 - -
Dere02g1294 704 Pfam Peptidase family M28 329 516 IPR007484 -
Dere02g1294 704 Pfam PA domain 163 229 IPR003137 -
Dere02g1294 704 SUPERFAMILY Transferrin receptor-like dimerisation domain 550 701 IPR036757 -
Dere02g1294 704 Pfam Transferrin receptor-like dimerisation domain 576 699 IPR007365 -
Dere02g1294 704 Gene3D Zn peptidases 65 550 - -
Dere02g1294 704 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 19 701 IPR039373 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1294 Dere-ChrDere02 12349735 12355547 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2571 01 40541837 40547039 Dere02g1294 02 12349735 12355547 CCT
Dere02g1294 02 12349735 12355547 Dere02g1294 02 12349735 12355547 ECH