Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2571 ATGCAGAAAATGGTTCAATTTCTGCCAAAACCAACCACCATATTCGCTGTAAAGCCCTCTCCTCTGGGTACCTTCGTTGTCGTACTCATCCTCTGCATTCTTGGTTTTTATACCCTGCATTACCCTCGCTTTTCTTCACCATCTTCCGCTTTCCGTAATGCTTCTCACTTCCGCCATATATTCCTTTCCTCTTCCTCTAACTTAACCATTGCCTCCTACCTCCGCGCCCTCACCCAACATCCGCACCTCGCCGGAACAAAACTCGCCTCTGACACCGCCACTTATGTCGTCAGCCATTTCAGAGACCTAGGCCTTCCGACCCACTCTGTGAGCTACAAAACCCTCCTCTCTTATCCTCTACACTCCTCCCTCTCGGCGCATTTTGGCGACGGGTCCTTCTCGGAGATTCCCTTAACTGAAACCGTTCGGTCCGATCAGGTTGGCCAGGACGTGGTACAAGCTTACCATGCATACTCGCCATCTGGTTCGGCGTACGCGAAAGCGGTTTTCGTGAATTACGGAAGGGAAGCGGATTATGATGCACTAAGGATGCTAGGGGTGAACGTTAGCGGATGCATAGTGTTAGCGAGGAAGGGCGGCGGTTTGACCAGAGGTGCGGTGGTAGAGAAGGCAGAGGCGCACGGTGCGGTGGCGGTATTAATATACACCGATGGCGACAGGTTCAAGAAGGGGTTTGAGAGAGGACACGTCATGAGAGGCGTAGGGGACCCACTAAGCCCTGGGTGGGCTGCGGTTGATGGCGGCGAGAGCTTGGATTTGGAAGATATTGAGGTTTTGCAAAGGTTTCCGAAAATTCCTTCTATGCCCCTTTCCACTGAGATCGCTGAGACCATTTTGTACTCGCTTGGAGGCGCTGTCGTGCCACAGGAATGGAAGAGTTCGCTAAGGTCTAAGGTCAGACTCAGGCATGTTGGTCCAGGCCCGACAATTCTCAATTTTAAATACGAGGGGGAAATGAAGGTGGGTACCATTCAAAATGTTTTTGCGGTCATAAAGGGACTGGAAGAACCAGATCGATATGTTCTACTTGGGAACCACAGAGATGCATGGACATATGGAGCCGTTGATCCCAGCAGTGGGACTGCAGCGTTACTTGACATTGCTCGCCGATATTCTCTTCTATTGCGCTTTGGATGGACTCCACGGAGGACAATCATCCTCTGCAGTTGGGATGCCGAGGAGTTTGGAATGATAGGATCCACTGAGTGGGTTGAACAGAACCTTGTGAATCTGGGTTCCAAAGCCGTAGCATACCTTAATGTAGATTGTGCTGTTCAAGGGTCGGGTTTCTTTGCTAGCTCAACTCCTCAGCTAGATAATCTCCTTCTTGAGATCACAAAAAAGGTGAAGGATCCTGACGAAGAGGGTACAACAGTGTATGAAAACTGGGTGGCTGCTGGTGGAAATTCTAATATTTTGAGGCTCAGTGGACTTGATTCTGATTTTGCTCCCTTTGTGCAACATGCAGGAGTTCCATCTATCGATGTGTATTATGGAAAAGATTTTCCTGTCTATCACACTGCTTTTGACTCCTATAACTGGATGACAGAGTATGGAGATCCATTTTTTCAGCGCCATGTGGCTGTTGCTGGAGTTTGGGGACTTCTAGCCCTTCGCTTGGCTGATGATTCCATCCTTCCTTTTAATTATCATACTTATGTGGATCAGTTACAGGTGTACAAGAACATATTGAGCAACTTGCTCGACCAATCAATCTCCCTGCATCCATTAACTATCTCAATACAGGAATTTGCTTCAGCTGTCAGAGAATTTGATGATGAACTAAAGACAGTGAGATTGCAAGAAACTGCTGGTTGCTTTGTACATAGTAAAAGGCGAGCATTAAACGATAGACTGATGCTTGCTGAAAAAGGCTTCCTGGATGCTGAGGGGCTTAGAGGAAGGAGTTGGTTCAGGCATCTTGTGTTTGGGCCTCCAAGTGACCCTGAAAGTAAGATGGATTTCTTCCCTGGAATTGCTGATTCTGTCGCGTGGTCAACCAGAATTAGTAAAAAAGAAGGGCAGGCAGCAATTCGACATGAGGTCTGGAGGGTTGCCAGAGCCATTCAAAGAGCCGCTTCAGCACTGAGAGGAGAATTCACCTAA 2127 0.4828 MQKMVQFLPKPTTIFAVKPSPLGTFVVVLILCILGFYTLHYPRFSSPSSAFRNASHFRHIFLSSSSNLTIASYLRALTQHPHLAGTKLASDTATYVVSHFRDLGLPTHSVSYKTLLSYPLHSSLSAHFGDGSFSEIPLTETVRSDQVGQDVVQAYHAYSPSGSAYAKAVFVNYGREADYDALRMLGVNVSGCIVLARKGGGLTRGAVVEKAEAHGAVAVLIYTDGDRFKKGFERGHVMRGVGDPLSPGWAAVDGGESLDLEDIEVLQRFPKIPSMPLSTEIAETILYSLGGAVVPQEWKSSLRSKVRLRHVGPGPTILNFKYEGEMKVGTIQNVFAVIKGLEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDIARRYSLLLRFGWTPRRTIILCSWDAEEFGMIGSTEWVEQNLVNLGSKAVAYLNVDCAVQGSGFFASSTPQLDNLLLEITKKVKDPDEEGTTVYENWVAAGGNSNILRLSGLDSDFAPFVQHAGVPSIDVYYGKDFPVYHTAFDSYNWMTEYGDPFFQRHVAVAGVWGLLALRLADDSILPFNYHTYVDQLQVYKNILSNLLDQSISLHPLTISIQEFASAVREFDDELKTVRLQETAGCFVHSKRRALNDRLMLAEKGFLDAEGLRGRSWFRHLVFGPPSDPESKMDFFPGIADSVAWSTRISKKEGQAAIRHEVWRVARAIQRAASALRGEFT 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2571 708 Pfam PA domain 166 230 IPR003137 -
Dere01g2571 708 Gene3D Zn peptidases 69 554 - -
Dere01g2571 708 SUPERFAMILY Transferrin receptor-like dimerisation domain 554 706 IPR036757 -
Dere01g2571 708 SUPERFAMILY PA domain 115 335 IPR046450 -
Dere01g2571 708 FunFam Os01g0740650 protein 324 554 - -
Dere01g2571 708 FunFam N-acetylated-alpha-linked acidic dipeptidase 2 555 706 - -
Dere01g2571 708 SUPERFAMILY Zn-dependent exopeptidases 70 552 - -
Dere01g2571 708 Pfam Peptidase family M28 333 520 IPR007484 -
Dere01g2571 708 Gene3D - 122 324 - -
Dere01g2571 708 Gene3D - 556 708 IPR036757 -
Dere01g2571 708 Pfam Transferrin receptor-like dimerisation domain 579 703 IPR007365 -
Dere01g2571 708 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 25 705 IPR039373 -
Dere01g2571 708 CDD M28_PSMA_like 330 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2571 Dere-ChrDere01 40541837 40547039 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2571 01 40541837 40547039 Dere02g1294 02 12349735 12355547 CCT
Dere01g2571 01 40541837 40547039 Dere01g2571 01 40541837 40547039 ECH