Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1286 ATGGATTCGAACGCAACTCCACTTTCCAACAAATTGGCAAAATGTTGCAACTGTGGGTGTAGATGTTCTTTGATAGCTGAATCTCCAGGGGCTTGGATCCGTTCCGTTAAACGGAAGCACGATGAGTTTGAACGGGGTAACCAATTGTTTCTACCTGGTTTGGATTACTTTTCAGTTGCACGGGTCCAAATTGAGAATGAATGTGCTGCATTGCGCGAGATAGTCAGCAGTCAACAAAAAACTATACAAGATTTATATGCTGAATTGGAGGAGGAGAGAAATGCTTCATCAACAGCTGCAAATGAGGCCATGTCAATGATATTAAGGTTGCAGAGGGAGAAGGCAGAGATTCAAATGGAATCCCGGCAGTTCAAGTCTTTTGTGGAGGAGAAGATGTCACATGATCAGGAGGAAGTTCTAGCATTTGAAGATTTGTTGTATAAAAGAGAACAAGCAATTGAGTCACTTACTTGTGAAGTGCAGGCTTATAAACATAGGATGATGAGCTTTGGGCTTACGGAATCCGAAGCAGATCGTCTGCTTATGGGAGATTTTGACTCTGAATATGAACCTGCCATCTGTGAATACCCTCCATTAAAGTGTAATTTAAATGAGATGCATGCTACCACGGATGCTGATGACATAGATGTTGACAAATATGCATGTGGTGAAACCCCTCGTGATCGTTTGAGGAATTTGGAAAATAGGATCTCTCAAATGGAAAGAAATCCCACTTATGGCCAGGTTGATGGGGATATTTCAGGAAAAAATATTCTAGAGAAGGTGATAGTTGGGCAGTCTCCTAGACGAACTAAACATTCAAGGAAATTTTCAAGTGATTCCATTTCATTTGTTGGAATGGGTGGAGAGATGGGACCTGAATCATTTGTGGATTCTCCAAAGCTCAGTACATCCTTGAAGAAGATAGATCATATCTCACAGCCAGAGGACCCGTCCAATTTGAAAAAGGTAGATAATGCATCAGAAGCTGGTGATGATTCAAGTGACAAAGTTTATACCATTGACTCTATTCATAATGGGGCACCATATAATGGTTTCAGAGACTCGAAACCTGTATCTAGTGTTTATGAAGACTATGCAACCACTCCGAGGGTAGATAATGTTGTTGGATATGAAGACCCTGACATTAAAAAGCTATACATGAGGCTTCAGGCACTTGAGGCTGATAGGGAATCGATGAAGCAGGCTTTGATTTCAATGAGTACTGATAAAGCACAGATTGTGTTACTGAAGGAAATAGCTCAACATTTGTGCAAAGAGATGTCACCACAAAGAAGAATGGCAGTGAGAAAGCCATCTATTGTTGGCAGAATATCGTCAGTTTTTAAGATAATCACAGATGCTGTTTCATGGAGAAAGAAAGCACGCCAATGCAAGTATACATTTGGGCAACCAGGCAACGGCGTTGGCTTGCAAACGCTTCTGGACAATGGTCCCCGTGTAAGGCAATGGAGATGTCTTTCGAGCACACAATTGAGAGGTTAG 1506 0.4157 MDSNATPLSNKLAKCCNCGCRCSLIAESPGAWIRSVKRKHDEFERGNQLFLPGLDYFSVARVQIENECAALREIVSSQQKTIQDLYAELEEERNASSTAANEAMSMILRLQREKAEIQMESRQFKSFVEEKMSHDQEEVLAFEDLLYKREQAIESLTCEVQAYKHRMMSFGLTESEADRLLMGDFDSEYEPAICEYPPLKCNLNEMHATTDADDIDVDKYACGETPRDRLRNLENRISQMERNPTYGQVDGDISGKNILEKVIVGQSPRRTKHSRKFSSDSISFVGMGGEMGPESFVDSPKLSTSLKKIDHISQPEDPSNLKKVDNASEAGDDSSDKVYTIDSIHNGAPYNGFRDSKPVSSVYEDYATTPRVDNVVGYEDPDIKKLYMRLQALEADRESMKQALISMSTDKAQIVLLKEIAQHLCKEMSPQRRMAVRKPSIVGRISSVFKIITDAVSWRKKARQCKYTFGQPGNGVGLQTLLDNGPRVRQWRCLSSTQLRG 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1286 501 Coils Coil 383 410 - -
Dere02g1286 501 ProSiteProfiles GTD-binding domain profile. 66 164 IPR007656 -
Dere02g1286 501 MobiDBLite consensus disorder prediction 312 337 - -
Dere02g1286 501 Coils Coil 75 120 - -
Dere02g1286 501 Pfam Zein-binding 70 160 IPR007656 -
Dere02g1286 501 PANTHER BNAANNG28530D PROTEIN 64 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1286 Dere-ChrDere02 12301630 12304751 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2577 01 40634249 40637244 Dere02g1286 02 12301630 12304751 CCT
Dere02g1286 02 12301630 12304751 Dere02g1286 02 12301630 12304751 ECH