Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2577 ATGGATTCGGAAGCAGTTCCATCTTCCAGAAATTCAGTAAAATGTTGCAACTACGGGTGTAATTGCTCATCGGCTACTGATTTCTCAGGAACTTGGCTTCGTTCTGTTAAACGGAAGCTTGATGAGTTCGAGCGTGATAACAACTTCTCTGTACCCGAGTTGGATTACTTTTCAGTTGCAAGGGTCCAAATTGAAAATGAATGTGAAGCCTTACGTGAGACGGTTGCTAGTCAACAACGGGCCATACAAGATCTATACGCTGAATTGGAAGAGGAGAGAAATGCTTCATCAACGGCAGCAAATGAGGCCATGTCTATGATATTGAGGTTGCAGAGGGAGAAAGCTGAGATTCAAATGGAAGCTCGGCAGTTCAAGCGTTTTGCAGAGGAGAAGACGTCACATGATCAGCAGGAGCTTTTAGCATTGGAGGATATGTTGTATAAGAGAGAGCAGACAATTCAGGCGCTTACTTGTGAAGTTCACGCTTATAAGCACAGGATGATGAGTTATGGCCTCACTGAGTCAGAGGCAGCAGGTGAAAGGAACCAGAGCACAGGGGAATTGGGTGATCAATATGAACTTCCCACCTATGATTACCCTTCTTTAAAGTGTAGTGGACATACTGCCATGGATGCTGATAATGATGACACAGATATTGAGAAATATGCATTTGGTGAAACTCCTTGTGATCGATTGAGAAATTTGGAAAATAGAATCTCCCAAATGGAAGGAAGTTCCTGTCATAATCAGGTAGATGGGGATTACATGGTGAAAAGTATTCTAGAGAAGGTAGTGGTTGGACAGTCTCCAAGGCGGAGAAAAGTTTCCAATGACTCAAGTTCATTTGTTGGGATAGGAAGAGAAACAGGTCCTGACTTTCTGACGGATTCTCCCAAGAGCTTTAGGAAGATGGATTATGTCTCACAGCCAGAGGAACCTTCCAATTTGAGAAAGGTAGATTATATATCAGAAGCTGGTGATGATATGAGTGACAGAGTTTACACTATTGACTCTGTTCATACTGGGACACCACACAAAGGCTTTTCAGAGTCCAAAGCTGGAGCTGTATATGAAGATTATACATTCACACCAAGGGAGTCGCTGAATCATGCTAAGTTTGAAGATCCCGACATAAAGAAGCTCTACATGAGACTTCAGGCTCTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGCGCACTGATAAAGCACAAGTGGTGTTACTGAAGGAAATAGCTCAACATTTGTGCAAAGAGATGTCACCACAAAGACAAATGGCAGTGAGGAAGCCATCCGTTGTTGGCAGTTTTTCATTCTTGTCAATTTTTAAGTGGATCACATCGTTGGTTTTGTGGAGAAAGAAAGCTGGTCAAAGCAAGTACATGTTTGGGCTTCCAGCCAATGGTGTGGGCTTACTTATGCTTTTGGACAAGGGGCAACGTTCAAGGCCATGGAAATGTGTCTCAAGCACCCAGTTGGGAGATTAG 1497 0.4322 MDSEAVPSSRNSVKCCNYGCNCSSATDFSGTWLRSVKRKLDEFERDNNFSVPELDYFSVARVQIENECEALRETVASQQRAIQDLYAELEEERNASSTAANEAMSMILRLQREKAEIQMEARQFKRFAEEKTSHDQQELLALEDMLYKREQTIQALTCEVHAYKHRMMSYGLTESEAAGERNQSTGELGDQYELPTYDYPSLKCSGHTAMDADNDDTDIEKYAFGETPCDRLRNLENRISQMEGSSCHNQVDGDYMVKSILEKVVVGQSPRRRKVSNDSSSFVGIGRETGPDFLTDSPKSFRKMDYVSQPEEPSNLRKVDYISEAGDDMSDRVYTIDSVHTGTPHKGFSESKAGAVYEDYTFTPRESLNHAKFEDPDIKKLYMRLQALEADRESMRQAIISMRTDKAQVVLLKEIAQHLCKEMSPQRQMAVRKPSVVGSFSFLSIFKWITSLVLWRKKAGQSKYMFGLPANGVGLLMLLDKGQRSRPWKCVSSTQLGD 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2577 498 Coils Coil 378 405 - -
Dere01g2577 498 Coils Coil 61 130 - -
Dere01g2577 498 PANTHER BNAANNG28530D PROTEIN 63 438 - -
Dere01g2577 498 Pfam Zein-binding 70 160 IPR007656 -
Dere01g2577 498 ProSiteProfiles GTD-binding domain profile. 66 164 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2577 Dere-ChrDere01 40634249 40637244 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2577 01 40634249 40637244 Dere02g1286 02 12301630 12304751 CCT
Dere01g2577 01 40634249 40637244 Dere01g2577 01 40634249 40637244 ECH