Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1244 ATGTCTGTAAAAGAGTGTGACTGTGAACACCACAAGTGGTGGCGCCGGAAAATATTCCGAATGATCTTTGCGGGGATCCTAGTATTCCTGTTCATAGTGCTTTTCACGATTCTAATAATCTGGGCAGTCCTGAGGCCGACAAAACCTTCCTTCATCCTTCAGGACGTCACCGTCTATGCCTTCAATGCCACCGTCCCCAACTTCTTGACCACAAACTTCCAAGTCACCCTCTTGTCCCGCAACCCGAACGACAAGATCGGAATCTACTACGACCGTCTCGACACCTACGTGGATTATCGCAACCAGCAAGTCACGTTCCGTACCTCCATCCCTCCCTCCTATCAGGGTCACAAAGAGGTCGACGTTTGGTCACCCTTCGTCTATGGCACCGACGTCCCCGTAGCTCCTTACAACTTCGTCGGACTCAGCCAGGACCAGTCCAACGGCAACGTTTTGGTCACCGTCAAGATCGACGGACGCGTCAGATGGAAAGTTGGGGCCTTCGTTACTGGTCGTTACCATTTGTACGTCAGGTGCCCCGCCTATATTACTTGGGGAGCTCGGAGTACTGGAATTTCCGTCGGCGGAAACGCCGTTAAGTATCAATTGGTCGAGCGATGCATTGTCAGCGTTTAA 636 0.5189 MSVKECDCEHHKWWRRKIFRMIFAGILVFLFIVLFTILIIWAVLRPTKPSFILQDVTVYAFNATVPNFLTTNFQVTLLSRNPNDKIGIYYDRLDTYVDYRNQQVTFRTSIPPSYQGHKEVDVWSPFVYGTDVPVAPYNFVGLSQDQSNGNVLVTVKIDGRVRWKVGAFVTGRYHLYVRCPAYITWGARSTGISVGGNAVKYQLVERCIVSV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1244 211 PANTHER OS05G0367900 PROTEIN 20 193 IPR044839 GO:0098542
Dere02g1244 211 Pfam Late embryogenesis abundant protein 76 178 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1244 Dere-ChrDere02 11907771 11908406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1244 11 179 EF-hand Containing Proteins AT5G21130 21.302 1.17e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2628 01 41098355 41102210 Dere02g1244 02 11907771 11908406 CCT
Dere02g1244 02 11907771 11908406 Dere02g1244 02 11907771 11908406 ECH