Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2628 ATGGGGAAGTTTGGGGAATTTTTTGTGGTTCGAAAAAGATCATGTAGGGACCTTCTTTGTGCATATAAACACCCACAAACGCGTCCATCACACGGCACCTTCCTTTTATCACAATCCCAGTGCTTCCCTCCCACACTTCCACCCTCCCTTTATCATACTCCTATTATCTCTTTTCCTCCTCCACTCTATCATATCATCCACCACCACTCTGCTCTCCCTCCTCCGTCCTCCGCCGCCATGAAGGAAAAAATATGCGACCACCACAAGGATAAGGGAAGGATGATCTTCCGCCGAATCTTTTGGGGTATAGTCATCTTCTTGTTCATAGTCCTCGTCACCATTCTCATAATCTGGGCAATTCTCCGCCCATCCAAGCCTTCCTTCGTCCTCCAAGACGTCACCGTATACGCCTTCAACGCCACCGTCCCCAACTTCCTCACCTCTAACTTCCAAGTCACACTCTCTTCCCGCAACCCTAACGACCAGATCGGAATCTACTACGACCACCTCGACGCCTACATCACCTACCAGAACCAGCAAGTCACCTACCGTACATCAATCCCGCCGTCGTATCAGGGTCACAACGATGTTGACGTGTGGTCGCCATTAGTCTTCGGCACAAACGTACCCGTAGCTCCCTACAACTTCGTCTATCTGAGTCAGGATCAATCCAACGGCAACGTCCTCGTCATCGTCAAAATTGATGCACGCGTGCGATGGAAAGTTGGGGCCTTCATTTCTGGCCATTACCATCTCTACGTACGGTGCCCGGCGTTCATTACTTTCGGGCCCCGGAGTAACGGAATTACCGTCGGTAATAACGCCGTTAAGTATCAGTTGGTCCAGCGATGCACCGCGAGCTTTTGA 867 0.5075 MGKFGEFFVVRKRSCRDLLCAYKHPQTRPSHGTFLLSQSQCFPPTLPPSLYHTPIISFPPPLYHIIHHHSALPPPSSAAMKEKICDHHKDKGRMIFRRIFWGIVIFLFIVLVTILIIWAILRPSKPSFVLQDVTVYAFNATVPNFLTSNFQVTLSSRNPNDQIGIYYDHLDAYITYQNQQVTYRTSIPPSYQGHNDVDVWSPLVFGTNVPVAPYNFVYLSQDQSNGNVLVIVKIDARVRWKVGAFISGHYHLYVRCPAFITFGPRSNGITVGNNAVKYQLVQRCTASF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2628 288 PANTHER OS05G0367900 PROTEIN 96 275 IPR044839 GO:0098542
Dere01g2628 288 Pfam Late embryogenesis abundant protein 153 256 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2628 Dere-ChrDere01 41098355 41102210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2628 59 256 EF-hand Containing Proteins AT5G21130 22.816 1.47e-08 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2628 01 41098355 41102210 Dere02g1244 02 11907771 11908406 CCT
Dere01g2628 01 41098355 41102210 Dere01g2628 01 41098355 41102210 ECH