Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1236 ATGGAAGAGACTAAATCCAGGTTCAAGCGTATTTGTGTGTTCTGTGGCAGCAGTTCTGGCAAGAAAGCTAGCTACCAGGAAGCTGCTGTTGAACTTGGCAAGGAACTGGTGGAGAGAAGGATTGATTTGGTCTACGGTGGTGGAAGCGTGGGGTTGATGGGTCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGGTTATCCCAAGAACTCTCATGCCCAGAGAGATAACTGGTGATCCTATTGGGGAAGTGAGGGCCGTATCTGATATGCATCAAAGGAAAGCTGAGATGGCCCGTCAAGCTGATGCCTTCATTGCCCTCCCTGGAGGCTATGGAACCCTAGAAGAATTGCTGGAGGTAATTACATGGGCTCAGCTTGGAATCCACCGCAAACCCGTGGGGCTCTTGAATGTGGATGGATACTACAATTCCTTGTTGTCGTTCATCGATCAGGCCGTTGATGAAGGCTTTATCTCCCCTACGGCACGTCGCATTATCGTGTCAGCACCCACTGCTAAACAATTGGTCAAAGAGCTAGAGGAACATGTACCAGAGCAAGATGAGGTGGTGTCCAAGTTGGTGTGGGAAGACAGACTAAATTTCGTGCCAGAATCAGAGGTCGCCATGTGA 642 0.5 MEETKSRFKRICVFCGSSSGKKASYQEAAVELGKELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPRTLMPREITGDPIGEVRAVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDQAVDEGFISPTARRIIVSAPTAKQLVKELEEHVPEQDEVVSKLVWEDRLNFVPESEVAM 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1236 213 Pfam Possible lysine decarboxylase 53 182 IPR031100 -
Dere02g1236 213 Gene3D - 1 185 - -
Dere02g1236 213 NCBIfam Rossman fold protein, TIGR00730 family 9 184 IPR005269 GO:0009691|GO:0016787
Dere02g1236 213 FunFam CASP-like protein 1 185 - -
Dere02g1236 213 PANTHER LOG FAMILY PROTEIN YJL055W 3 203 - -
Dere02g1236 213 SUPERFAMILY MCP/YpsA-like 7 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1236 Dere-ChrDere02 11840473 11844029 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2636 01 41195695 41198997 Dere02g1236 02 11840473 11844029 CCT
Dere02g1236 02 11840473 11844029 Dere02g1236 02 11840473 11844029 ECH