Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere01g2636 | ATGGAAGAGACAGAATCAAGGTTCAAACGTATTTGTGTGTTCTGCGGGAGCAGTTCAGGCAAGAAACCTAGCTACCAGGATGCCGCTGTGCAACTTGGGAAGGAGCTGGTGGAGAGAAGGATTGACTTGGTCTACGGAGGTGGTAGCTTGGGGCTCATGGGTCTCGTTTCGCAGGCCGTTCATGATGGCGGCCGCCATGTACTAGGGATTATCCCAGTAAGTCTCATGCCGAGAGAGTTAACCGGAGATCCAATTGGTGAAGTTAGAGCCGTATCAGATATGCACCAAAGGAAAGCCGAGATGGCCCGTCAAGCTGATGCCTTCATTGCCCTCCCTGGAGGCTATGGAACCCTTGAGGAATTGCTTGAAGTCATTACATGGGCTCAGCTCGGAATCCACAGCAAACCCGTGGGGCTGTTGAATGTGGATGGATTCTATAATTCCCTGTTGTCGTTCATTGACAAGGCCGTTGATGAAGGCTTTATCTCCTCTACGGCACGTCGCATTATTGTGTCAGCACCCACACCCAAACAGTTGATCAGAGAGCTTGAGGTGCATCATCATTTTCTCCTCATCATCTGA | 582 | 0.5052 | MEETESRFKRICVFCGSSSGKKPSYQDAAVQLGKELVERRIDLVYGGGSLGLMGLVSQAVHDGGRHVLGIIPVSLMPRELTGDPIGEVRAVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISSTARRIIVSAPTPKQLIRELEVHHHFLLII | 193 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere01g2636 | 193 | Gene3D | - | 1 | 185 | - | - | |
| Dere01g2636 | 193 | PANTHER | LOG FAMILY PROTEIN YJL055W | 3 | 185 | - | - | |
| Dere01g2636 | 193 | Pfam | Possible lysine decarboxylase | 53 | 182 | IPR031100 | - | |
| Dere01g2636 | 193 | SUPERFAMILY | MCP/YpsA-like | 7 | 183 | - | - | |
| Dere01g2636 | 193 | FunFam | CASP-like protein | 1 | 185 | - | - | |
| Dere01g2636 | 193 | NCBIfam | Rossman fold protein, TIGR00730 family | 9 | 184 | IPR005269 | GO:0009691|GO:0016787 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere01g2636 | Dere-ChrDere01 | 41195695 | 41198997 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dere01g2636 | 01 | 41195695 | 41198997 | Dere02g1236 | 02 | 11840473 | 11844029 | CCT | |
| Dere01g2636 | 01 | 41195695 | 41198997 | Dere01g2636 | 01 | 41195695 | 41198997 | ECH |