Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1130 ATGGAAATTGGAGACGCGAGCAGAAAGGAGATACAAGTAGAGGTTTCTTGGATTCCGACTACCCCTGTCAAGCCCAATCTTCCAAGATCAGTGCCGATCTGCACGGCTAGAGAAGGAAACCAGCTGAACCAGAACAGTTGCTTGGGAACAAGCTCATGTTGTAATTCAAGTAATGACTATGAAGTTGCATGTTTCAAATCGTCACCTAGTGCAAAGATAAGCAGTCAACAAGACCAGGCAGCAGCTGCCGTAACAGCAACAAATGTTACTGGCGACAATGTGGGGACTTGTGAGCAGCTATCCTCTGACACCCTTTCCATCTGCGAAAATATTGGCTTTGCCGACCTTGACCTTTTCGCTCTGGCAAATGCTGCGTCGGCACATGCTAATGCAGCACATCCAGCCAATAATGGAGTGAAGAATCCAAATATTCCTACTTCGGATTCACAGTTCAAGGGCGACTCAGTAGCCAACCCCAGCTATACATTACTCAACCATCACAGTCTCTCTATTGACCAAATCGCAAACGATACATTTGATGGCAATCCCCAAAAACCTCAGGGTGCATCATACACTGCTGGCGGAAGCAAAACCATTTCACAGTTTGCACCAGCTACCCCAGACAAGGCCATCAGAGCAGAATGCGGGCAAGTTGCTGGACTGCAGATAATTATGAATGAAAAAGATCAAGGGCAAGAGGAGAGAAATGTCTTAGCGACAAATGTGGACAAAAATGAAACCTCACCTAACCAAGAACTCTCTGACCTTGTTATAGATTTTTCATTTGCTGCTGTTTTTACACCATCTGAGGAGAATCACAACCTAGACAAGGGAGGCAGCTGCAATAATGATCTGTATAGAACACCGCCACAGAAACCAAGGAGAAAAAAACACCGTCCCAAGGTTATCACAGAAGGCAAATCTAAAAGAACTCAAAAGTCAGGTACCCCAAAGCCTCCTCAATCAAAAGAAAACCAAACTAGCAAGAGGAGGTATGTGAGGAGGAAAGGATTAAATACAACTTCTACAACTACTTCAATAGAGGTGACAGGGGAATCCACTGATAAAATGATGCCTGAATCTAACAAAAAGTCTTGTAGAAGGTCCTTAAATTTTCACATAGTAGAGCAACCAAGAAATGAAAATTCTTCGTGCACAGGAAGTGTGACAATACATCTTGATCAAAGCAAAGGGACTAATGTGAGGGATGTGGAAATGTGTGTAGGCCTAGCCTGTGATCCAAACCTATCCATGAAGCAAGCACTAAATGATTACACATCATTACCAGTAGATATACAAGCAGCGAATTCATCTCTTTCAAATAGCAATCCCCCAGGAGCAAAGCCAAATGCTCACTCTGTAACCAGCAGTAGCAGAAGAAAGGGCCAGGTGAAATCTCAGGATGGACAACCTCAATCAAAAAAAAACCAAACTGGCAAGAGAAGGTATGTGAGAAGGAAAGGATTAAAAAGGACTTCTACAACTCCACCAACTGCAGTGACAGAAGAGTTCACTGAGCCAATGATGCCTAAATCTAATAAGAAGTCATGTAGAAAGTCCTTAAATCTTCACATAGGACAGCAACCAAGAGATGAAAATTTTGCATACAGAGAAAATGAAACAATACATCTCGATCTGCACAAAGAAATAGGTACAAATGATTACATGTCACTACCAAAAGATACACAAGCCCCGAGCATATCTTTTTCATACAGAAATTCCACTGGTGCAAAGCCAAATGCCCACTCTGTAAAGAAAAATATCAAAAGAAAGGGCTCTGTGACATCTTTGGATGGACAAGGAAACACTGCCAGTGTGATATCAAATTATTCTAACAGCAATTACAGTGGAATTTGGGCCACAGGATTACATATGGATGGTTTCAAGAGAAAGTATTCCAGTTTTAATGAACATGCAGAAACCAGCGGCATTAATATGATAGGTGCTCACAGTAATGAATTACTTGCATACCAGGTGATGGTTGGGGATCAATGTCCAAACATTCAGAATGAAAGAACTGGAGAAGGGCAAATCTTTAAGACATCAAATTCTGACAAACAATCATTTGATGATGCAGAAGCACCTCAAACACACATTGAGGCTATTTTTGCAGAGATGTATACATCAGTTACTAGAAAGAAGCGAGCTAATCAGAAAAAAATTCCTGTAAGTTCAACATATTGTAGCACAAATGAAATGCAACTGCATTATAACTTTGTATTGGACAATTACGACCCGTCCTTGGACAAGTCATCGGGTGCTGCTCATGAAGTATCACCGAAAAGCATGAATACTGTGGATGCATTGACAGAGCAATTTAGACACCTAGAGATAAATACAGAAGCCAGAGACCTTGCATTTCATGAGCAGAATGCACTTATCCCTTACAACCATAAGAATAGAAACAAAGCCCTTGTCCATGAAGGTGGTACCATCATTCCCTGGGAGAGTGCATTTGAACAAATCAGAAAACGGCGTCTGCGGCCTAAAGTTGACCTTGATGAGGAGACTAATAGAGTGTGGCAGCTTTTGTTGTTAGATATAAACAGCCATGGGGTTGATGGAACAGATGAAGACAAGGCAAAATGGTGGGAAGAAGAACGAAGAGTCTTCCGTGGACGAGCAGACTCATTTATTGCACAGATGCATCTTGTGCAAGGAGACAGACGCTTTTCTCAATGGAAAGGATCTGTTGTGGATTCTGTTATTGGAGTTTTCCTCACTCAAAATGTCTCAGACCATCTTTCCAGTTCTGCTTTCATGTCACTTGCTGCTCAGTTTCCCCTAAAGACAAGCAGCGAGTGCAAAAGATACCACAAGGAAGGAACAAGCTTGGTAGTCAGTGAACCACAAGTTCACATTGTGGAACCAGAAGAGAATACAAGGTATGACCATAGTTCTATGGCAACAGACATCATGGAGAACATTGTTGACAGTACGCTTCTAGAAATGGCAAATTCAACCATGTTACATGAAGTCAGTAGTCAAGGAAGCAAGTCAACTGAGAACTTAAAGGATGCATATGGTCAATCTTTAGGTATGAGGCATGAAAACCAAACGGAAAACCTGGAAAAATCAGATGTAAATCATGGCTCCTTAGAAGCTTCCGTCATCCCTTCCTGTAACCATACTTTGAAAGTGACCCCCAACTCACGAATACTTGATGTTTGCTGCTCTGACCCATTCAAAACAGAAGCCCTGTGTGGCTTCTTAAAGAATAAAGTTGAAAATGATATAAACAAGTCTACCTTTCAAACAACAGAAAGCCAAGCTTCAATTGCCCAATCTCAAAGCATGTCAACTCAGCTTAATCTAGAGGATCAAAGCAATAACATGCAACACAGCTTGTTTCTCGGTTATGGACAAACTCAAGATTTAATGCAGAAAACAAGGGATATAGATACTAATGATCTCACCTATACAGGGAGGAATGAAACCCAAAAGAAAAATACTGCCTCTATAAAAACAAAGGGAGGAAGGCTTGCCAAGAAAGAAAAAGCTGATTTTAACTGGGATAATCTAAGAAAACAAGCAGAGGCTAAGACAGGGAAAGGAGAAAGGACAGCAAACACCATGGACTCTTTAGACTGGGATGCTGTAAGATGTGCAGATGTCAATGAAATTGCTAATGCAATCAAAGATAGGGGAATGAACAACGTTCTTGCAGAACGTATCAAGAATTTTCTCACTAGACTGGTTGAAGAACATGGCCGCATTGATCTTGAATGGTTAAGGGAAGTTCCACCTGATCAAGCCAAAGAATACTTGCTAAGCATAAGAGGATTGGGATTGAAAAGCGTAGAGTGTGTACGGCTTTTAACATTGCACCATCTTGCCTTCCCGGTGGACACAAATGTTGGGCGTATAGCTGTACGACTGGGATGGGTGCCTCTCCAGCCTTTGCCTGAGTCACTACAATTGCATCTTCTAGAAATGTACCCATTGTTGGAATCCATACAAAAATATCTCTGGCCCCGACTCTGCAAGCTGGATCAGAAAACATTGTATGAGCTGCATTACCAGATGATTACATTCGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGTCCAATGAGAGGAGAATGCAGACACTTTGCAAGTGCATTTGCTAGTGCAAGGCTCGCCCTGCCAGGACCAGAGCAGAATTGTATAATTAGCACAGCAGGAAACAATCTGACAGATTCGAACCCGTCTATCATTACCAGTCAGTTGCCCTTGTCTCTCCCTTTACTCACAAACCAAGCAGAAGAAACTCAACAAACAGAAGAGAGCAGGGAACTGGAAGCAAAATCTGAAATCAATATCTGCCAACCTATCATTGAAGAGCCAGCAACACCAGAGGCAGAATGTATACAAGTAGCAGAAAATGATATAGAGGATGCTTTCTATGAGGATACTTGTGAAATTCCTACCATCAAGCTTGACATTGAAGAGTTCACTCTGAATTTACAAAGTTATATGCAAGACAACATGGAACTTCAAGCAGGTGAAATGTCTAAGGCCTTAGTTGCCCTGACTCCAGAGGCTGCTTCCATTCCTACACCCAAGCTAAAGAATGTCAGCCAACTACGAACAGAGCATTGTGTTTATGAACTACCAGATTCACATCCTCTTCTGCAAGGGTGGGACAAGCGAGAACCTGGTGACCCTTGCAAATACCTTCTTGCTATATGGACTCCAGGTGAGACGGAAAATTCTATACAGCCACCTGAAATCAAATGCAGCTTCCAAGAATGTGGCCAACTTTGTAACAATAAGGAGTGTTTCCCATGCAACAGTATCCGTGAAGCAAATTTACAGATAGTACGAGGGACATTCCTGATACCATGTAGAACAGCCATGCGAGGAAGCTTTCCACTAAATGGCACCTATTTTCAAGTGAATGAGGTATTTGCTGACCATGACTCAAGTCTAAACCCAATTAACGTTCCCCGAAGTTGGATCTGGAATCTCAATAGGAAAACAGTATATTTTGGAACCTCCATACCATCAATTTTTAAAGGTTTATCAACACCAGAAATTCAACAATGCTTTTGGAGAGGATATGTCTGTGTGCGGGGATTTGACAGGGAAAGACGAGCACCCCGTCCTCTGATGGCTAGACTACACTTCCCCGCCAGCAAGTTGGCCAAGACCAAAGAGTCAAAGACAGCTAACAAGTAG 5175 0.4205 MEIGDASRKEIQVEVSWIPTTPVKPNLPRSVPICTAREGNQLNQNSCLGTSSCCNSSNDYEVACFKSSPSAKISSQQDQAAAAVTATNVTGDNVGTCEQLSSDTLSICENIGFADLDLFALANAASAHANAAHPANNGVKNPNIPTSDSQFKGDSVANPSYTLLNHHSLSIDQIANDTFDGNPQKPQGASYTAGGSKTISQFAPATPDKAIRAECGQVAGLQIIMNEKDQGQEERNVLATNVDKNETSPNQELSDLVIDFSFAAVFTPSEENHNLDKGGSCNNDLYRTPPQKPRRKKHRPKVITEGKSKRTQKSGTPKPPQSKENQTSKRRYVRRKGLNTTSTTTSIEVTGESTDKMMPESNKKSCRRSLNFHIVEQPRNENSSCTGSVTIHLDQSKGTNVRDVEMCVGLACDPNLSMKQALNDYTSLPVDIQAANSSLSNSNPPGAKPNAHSVTSSSRRKGQVKSQDGQPQSKKNQTGKRRYVRRKGLKRTSTTPPTAVTEEFTEPMMPKSNKKSCRKSLNLHIGQQPRDENFAYRENETIHLDLHKEIGTNDYMSLPKDTQAPSISFSYRNSTGAKPNAHSVKKNIKRKGSVTSLDGQGNTASVISNYSNSNYSGIWATGLHMDGFKRKYSSFNEHAETSGINMIGAHSNELLAYQVMVGDQCPNIQNERTGEGQIFKTSNSDKQSFDDAEAPQTHIEAIFAEMYTSVTRKKRANQKKIPVSSTYCSTNEMQLHYNFVLDNYDPSLDKSSGAAHEVSPKSMNTVDALTEQFRHLEINTEARDLAFHEQNALIPYNHKNRNKALVHEGGTIIPWESAFEQIRKRRLRPKVDLDEETNRVWQLLLLDINSHGVDGTDEDKAKWWEEERRVFRGRADSFIAQMHLVQGDRRFSQWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAAQFPLKTSSECKRYHKEGTSLVVSEPQVHIVEPEENTRYDHSSMATDIMENIVDSTLLEMANSTMLHEVSSQGSKSTENLKDAYGQSLGMRHENQTENLEKSDVNHGSLEASVIPSCNHTLKVTPNSRILDVCCSDPFKTEALCGFLKNKVENDINKSTFQTTESQASIAQSQSMSTQLNLEDQSNNMQHSLFLGYGQTQDLMQKTRDIDTNDLTYTGRNETQKKNTASIKTKGGRLAKKEKADFNWDNLRKQAEAKTGKGERTANTMDSLDWDAVRCADVNEIANAIKDRGMNNVLAERIKNFLTRLVEEHGRIDLEWLREVPPDQAKEYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYPLLESIQKYLWPRLCKLDQKTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQNCIISTAGNNLTDSNPSIITSQLPLSLPLLTNQAEETQQTEESRELEAKSEINICQPIIEEPATPEAECIQVAENDIEDAFYEDTCEIPTIKLDIEEFTLNLQSYMQDNMELQAGEMSKALVALTPEAASIPTPKLKNVSQLRTEHCVYELPDSHPLLQGWDKREPGDPCKYLLAIWTPGETENSIQPPEIKCSFQECGQLCNNKECFPCNSIREANLQIVRGTFLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPINVPRSWIWNLNRKTVYFGTSIPSIFKGLSTPEIQQCFWRGYVCVRGFDRERRAPRPLMARLHFPASKLAKTKESKTANK 1724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1130 1724 Pfam RRM in Demeter 1608 1708 IPR028925 -
Dere02g1130 1724 MobiDBLite consensus disorder prediction 270 363 - -
Dere02g1130 1724 MobiDBLite consensus disorder prediction 436 516 - -
Dere02g1130 1724 Gene3D Hypothetical protein; domain 2 1194 1277 - -
Dere02g1130 1724 Gene3D - 1278 1366 IPR023170 -
Dere02g1130 1724 SMART ccc3 1349 1369 IPR003651 GO:0051539
Dere02g1130 1724 MobiDBLite consensus disorder prediction 436 477 - -
Dere02g1130 1724 Pfam Permuted single zf-CXXC unit 1574 1605 IPR028924 -
Dere02g1130 1724 MobiDBLite consensus disorder prediction 273 287 - -
Dere02g1130 1724 MobiDBLite consensus disorder prediction 337 356 - -
Dere02g1130 1724 FunFam DNA glycosylase/AP lyase ROS1 1270 1378 - -
Dere02g1130 1724 SMART endo3end 1178 1348 IPR003265 GO:0006284
Dere02g1130 1724 SUPERFAMILY DNA-glycosylase 873 1371 IPR011257 GO:0003824|GO:0006281
Dere02g1130 1724 CDD ENDO3c 1196 1314 IPR003265 GO:0006284
Dere02g1130 1724 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 196 456 IPR044811 GO:0019104|GO:0035514|GO:0080111
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1130 Dere-ChrDere02 10795045 10804832 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0260 01 7010323 7025869 Dere02g1130 02 10795045 10804832 CCT
Dere02g1130 02 10795045 10804832 Dere02g1130 02 10795045 10804832 ECH