Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0260 ATGATGAACTTCGGAGAAAAACCTATTTCTCCAGAAGAGAAACGAGTTCAGATGAATGCTTCTTGGGTACCTGTCACCCCTGAGAAGCCAATTCAAATCAGATCCAATCCAATATCAGCAGACTGGCAGGAAAACCGAAAGGAAGGAGGAAATTTGAAGAATTTAACTATACCTGGAATTGGTAACATGAAAGAGATGCTGCAGTATAATGGGCCAGATCAAAATATCCATCAAATAGAACAAACAGAAGCGTACAATAATTTCTACGGAGGCTCTTCTGAGAGAAACAAGGTCATCAATCACATTGATGGCTCCTACAAAATGGCCTTGCACTTTGACAGCAGTAGATTGAATTTGAATACTTTGGAACTTCTCCTCATGCAGAATGCAACAAACATTGCTTCTGCTAATAGTAGTTTAGGTGAAAGCATAAGCATGGCAGCAAGAACACCACTACTCCCAAAATTTCACCCCCACACTAGCAGTAACAGCGGAGATTTCAGTGCAGGTGGTTTCACTGTCAACGAAAGCAATTATTATACAGGTTCAGACACAGTCTACACAGATGCAAATCTTTTGGTTCCAAATAAGAATTCCGAATTTGACAACAGCAACTCATACAGTTTGCTCAACAACGACATTCACTGCACATTCACAAGCCTGTTGAATAGTAGCCTATCTGAGTCTGAGATAGCCAATGGTGGTTTTTACATACCTTGCAGACCTAAGTATGATCAAAACTCTGCACCAGTCACAGAAGCTGATGATGTCTTCGGTTTCACCAACTCCTTCCAATTTGTACCAGGAACGATGGATCAGCTCAATGTGTTTGCAGACAACCAGCTTTGTACAAAGTATGCAACAGCTGAAAGCCAAACTCAGGAGAAAGACAAGCAAGAAAACTTGGTTGCTTCCACAGAAAATGAATACCATGAATATTGCAATGGACTTCTACAGCATATTGTAGATACTTCATCTGCAATATCTATGTCATATAGCAAAAATAAGGGTACTGAAAATTATCATTGTTGCAGCGGAAGTGGCCTGGATTTTGATCTGAACAAGACACCTGAGCAGAAAGCACCAAAGCGAAGAAAACATAGGCCAAAGGTGATTGTCGAAGGCAAGCCCAAAAGAACTCCGAATCCTGCAACACGAAAGAAGACAGAGTCTAAGGAGAGTCCAACCCAAAAGAGGAAGTATGTACGAAAAAAAGTCCCAAAAGAAGCAGGAACACCTCAAGTTGACGTTCCAGAGACTTTAAATTCTACGACCACAACTAGAAAATCTTGCAAGAAAGCTCTAAATTTTGGTTTAGAAAAGAGTAGATATGGAGACCACAACAAAATAGTTGATCAGCAGGAGATCCAGCAGAGAAATGAGAAAGTTTTCAACATCAGTTCAGACAATCAGATCACAGAGTTGCTCAGTGGAGCATATGTGAGTTATGCTACAAACTCTGCTTTGTTGCTCAGTGAGCAGGATGGATTTACAGTAGAAAACCAGCAACCCAGAAACATAGATGGTGTTCCTCTTTTATTGAATCAAAAGCTAACTGAAAAATTCTTGCCGGATAGGCAAGCAAATGTACCCATGTCAGAAACTACTGAACAACAGATTAAAAATTTGTCACACACTGAGAAAGGTCCAGTTCAAGGAAATGGTGGTTTGTGCCAAGAAGGATATAGTGGATGCTTACAGCAAGGAATTCATGTGGATGGAATTAACAATGTTCTCTTCCAATCAGAGAAATGTTTTGAGAACCCTGAGAAGACCAAATTACCAACGTCTCAGAACAACCTTCATTGGGTGCCAAACATTTTGTCCTATTCCATTGAAGGAAGCAATTCGAAGAGAAAAGTTTGCCATGCTGTCAAGAAGCAATATGTCTCAGACACAAATCCTCTTGATTCTTCCTCGTTGCACCAGGAGGTTTTCCAAGTGGATGAAATTTATAATGGCATGCCTCTGGACAAAGAAATATTGAAAACTCATAAAAGGAAAAGAACACAAAATAAACTTGGTTCACAAAAAGTAAGAACAAAAGGCAAAAATGAATCTAAAAGACAATTCAACAATGAGATACCAAACTGCTGTATTGAAGGTAAAAGATCTGAAGAGGAGCCAAACACTGGAGCCACCAAACTTGCTGGTGATGGCTTTGATAGCTCAGATCCACCACACCAGATATATCCCACATCAATAGATGAGATCATTTGTCGACTGAAAGATCTCAATCTTGGGCAGAGCAACATATCAGGAATAGATGGACAAAAAGCAATTGTCCTATATAAGGGAGAAGGTTCAATTGTTCCATATAAATCTACCAAAAAACATAAACCACGACCCAAAGTGGATCTTGACCTGGAAACAGAGAGAACCTGGAAACTACTGATGGGCATGGAAGGGAGTGAAGGCCTTGAAGGAAGCTACAAGGAAAAGGAGAAGTGGTGGGAAGAGGAAAGAGAAGTTTTTCGTGGACGAGTCAATTCCTTCATTGCAAGAATGCATCTTGTCCAAGGAGATAGACGCTTTTCACAGTGGAAAGGATCAGTAGTTGATTCGGTGATAGGAGTTTTCCTTACTCAGAATGTTTCAGACCATCTGTCAAGCTCAGCCTTCATGTCTCTAGCAGCAAGGTTTCCTCTTAAGTCAGCATGTGACAAGAGATCATGCTATATTGTTGGCACATACAAATTGGTTGAAGAACCGGAAGTCTGCATTGTGAATAGAGATGATATAATAATATCATATAACAGAAGACTAAATCAACCAACCTTCCATCAAGGCTTTGTGCCTCATGATACAAGAGATCATTTGACAGATAGCAAGGCCTCAAGAACAGAAAGAAGCCGAAAGGAGCCAGAAAATCAGAGCTTGGAGGAAGAAATCATATCGTCACAAGATTCTCTTGATTCCTCAGTCACCGAAGCCACCAAAGGGATCAGATCCTGCTCAGGTTCCAATTCAGAAGCAGAAGGCCCTACAACTCAGTGTGAACCCAGCAAGACTCAACTTTTATATTCAACAAATTCTCTAGAGGTTGGAAAGATCACTATGTTCCAAGAATTTTACAAAAGTGTAAATGGAGTGCCACTGTTTGAGGAGATAACCAAAGATGGACAGATGCTACATGAAAAATATGCCAAACAAAAGTCAAGATCAGGCCAAAATGATTGTCTCATTTCCCATTCAGCGTTCAATCATCCCATCAATTTTGGCAATCCACAAAAGAGAGTGCCTGAAGTTTCTCAGAACATGGGGCAGGATGGCACAGTGAACAATTCCCCAAACATTTGTAATTACATGGAAGGGTTTCATGCTGAAAAACAGACATCTGAAAGAAACAGACCAGCCTATTCAGATGATAGTACTGCTAAACCACAGCCACAGGAACAACATTTCATATCTGGCACTTCATATAATGAGGGCAAGGTGAAAGTTTCAAAACCAAGGAAAAAAAATCCTGAGACTGTGAAGAATACCGTTGATTGGGACAAGTTAAGAAAGAAGGAATTTCTGAACAGACTGGTTAGAGAACATGAAAGCATTGATCTGGAGTGGTTAAGAGATGTTCCCCCTGATAAAGCAAAAGACTATCTGCTAAGCATACGAGGTTTGGGGCTTAAAAGCGTGGAGTGTGTACGACTTCTAACTCTTCACCATCTGGCTTTCCCGGTTGACACAAATGTTGGAAGGATAGCAGTTAGACTTGGATGGGTCCCTCTTCAACCACTTCCTGAATCACTTCAGTTACACCTCCTTGAATTGTATGAGCTGCACTACCAGATGATTACCTTTGGAAAGGTTTTCTGCACAAAGAGTAAACCGAATTGCAATGCATGTCCAATGCGTGCTGAGTGCAGACACTTTGCAAGTGCTTTTGCAAGTGCACGGCTTGCATTGCCAGGACCAGAAGAGAAACGAATAGTGAGTACCCCTGTTGACATTGCGACTGAGAGAAACTATGCTCTCACCGTGAATCCGGTGGTACTACCTCTTCCTGACAACTTCCTCAAGGAAGCAAGTTCTGAAATTGGTAAGTGTGAGCCAATCATTGAAGTACCGGCAACACCAGAACAAGAGTTCCCAGACACACAGACACTGGAAAGTGACATTGAGGACTCTTTCTGGGAAGATCCTGATGAAATTCCAACTATCAACCTCAATATTGAAGAGTTGACAATGAATATACAAAACTACATGCAAGAGAACATGGAACTCCAAGAAGGTGACATGTCCAAGGCCCTTGTCGCATTAAATCCAGATACAGCTTCCATTCCTATGCCAAAACTGAAGAATGTGAGTCGGCTAAGGACAGAACACCAAGTATATGAACTTCCAGATTCTCATCCTCTCTTGGAAAAGATGGATAAACGCGAACCTGATGACCCAAGTCCATATCTTCTTGCAATTTGGACACCAGGTGAAACTGCAAATTCGATTGAACCACCAGAAAGAAGATGCATATCACAAGACTCAAACAACCTATGCAATGACAAGACATGCTATTCATGTAATAGCATTAGAGAAGCTAATTCACAAACAGTCAGGGGAACACTCCTGGTATTTGCTGATCATGCATCCAGCATTCAACCCCTTAATGTCCCTAGAGAATGGATATGGAATTTGCCAAGGAGGACTGTGCACTTTGGAACCTCTGTATCAACCATTTTCAAAGGATTTGTTTGTGTCAGGGGGTTTGACCAAGAAACACGAGCACCCCGCCCTCTTATGGCCAGATTGCACTTTCCAGCTAATCATGGACTGGTTCCTGGTCATCTGGTCTGGTCTGGTTATGATAACAATGGTGTTAGTCGCTTTGTTAGTTCTTACCGAAATACATTGTTACTACTGAACTCAACTTCATCAACTGTTATCCTTGATAATATAATGTGCAATCCAAATAGCCAATGCATTGAACAACGGAATTCAGCTATCAAGATTGAGTCAACCAACCTACGATCAAGGCTTGTGCCTCATGAGACAAGAGAGCATTTGAGAGATAGCAAGACCTCAGGAATAGATAGAAGCCCAAAAGAGCCAAATAATCAGAGCTTGGAGGAAGAAATCATAACGTCACAAAATTCTCTAGGTTCCTCAATCACTGAAGCCGCAAAAGGCATCAGATCTTGCTCAGGTTCCAATTCAGAAGCAGAAGGCCCTACAACTGATTACAAGACACTGACTCCCCAGGAAGTAAGAAGAAGTGTTGACAAATCCACAGAGAAGCAGCATGGGCCACTAGGGTCTCAGGAGCTACCAACAATTAATCCATATGAACCATTAGGCATGCATCTTGTCCACCAACAAGAGATTTCTTGA 5325 0.4133 MMNFGEKPISPEEKRVQMNASWVPVTPEKPIQIRSNPISADWQENRKEGGNLKNLTIPGIGNMKEMLQYNGPDQNIHQIEQTEAYNNFYGGSSERNKVINHIDGSYKMALHFDSSRLNLNTLELLLMQNATNIASANSSLGESISMAARTPLLPKFHPHTSSNSGDFSAGGFTVNESNYYTGSDTVYTDANLLVPNKNSEFDNSNSYSLLNNDIHCTFTSLLNSSLSESEIANGGFYIPCRPKYDQNSAPVTEADDVFGFTNSFQFVPGTMDQLNVFADNQLCTKYATAESQTQEKDKQENLVASTENEYHEYCNGLLQHIVDTSSAISMSYSKNKGTENYHCCSGSGLDFDLNKTPEQKAPKRRKHRPKVIVEGKPKRTPNPATRKKTESKESPTQKRKYVRKKVPKEAGTPQVDVPETLNSTTTTRKSCKKALNFGLEKSRYGDHNKIVDQQEIQQRNEKVFNISSDNQITELLSGAYVSYATNSALLLSEQDGFTVENQQPRNIDGVPLLLNQKLTEKFLPDRQANVPMSETTEQQIKNLSHTEKGPVQGNGGLCQEGYSGCLQQGIHVDGINNVLFQSEKCFENPEKTKLPTSQNNLHWVPNILSYSIEGSNSKRKVCHAVKKQYVSDTNPLDSSSLHQEVFQVDEIYNGMPLDKEILKTHKRKRTQNKLGSQKVRTKGKNESKRQFNNEIPNCCIEGKRSEEEPNTGATKLAGDGFDSSDPPHQIYPTSIDEIICRLKDLNLGQSNISGIDGQKAIVLYKGEGSIVPYKSTKKHKPRPKVDLDLETERTWKLLMGMEGSEGLEGSYKEKEKWWEEEREVFRGRVNSFIARMHLVQGDRRFSQWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAARFPLKSACDKRSCYIVGTYKLVEEPEVCIVNRDDIIISYNRRLNQPTFHQGFVPHDTRDHLTDSKASRTERSRKEPENQSLEEEIISSQDSLDSSVTEATKGIRSCSGSNSEAEGPTTQCEPSKTQLLYSTNSLEVGKITMFQEFYKSVNGVPLFEEITKDGQMLHEKYAKQKSRSGQNDCLISHSAFNHPINFGNPQKRVPEVSQNMGQDGTVNNSPNICNYMEGFHAEKQTSERNRPAYSDDSTAKPQPQEQHFISGTSYNEGKVKVSKPRKKNPETVKNTVDWDKLRKKEFLNRLVREHESIDLEWLRDVPPDKAKDYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYELHYQMITFGKVFCTKSKPNCNACPMRAECRHFASAFASARLALPGPEEKRIVSTPVDIATERNYALTVNPVVLPLPDNFLKEASSEIGKCEPIIEVPATPEQEFPDTQTLESDIEDSFWEDPDEIPTINLNIEELTMNIQNYMQENMELQEGDMSKALVALNPDTASIPMPKLKNVSRLRTEHQVYELPDSHPLLEKMDKREPDDPSPYLLAIWTPGETANSIEPPERRCISQDSNNLCNDKTCYSCNSIREANSQTVRGTLLVFADHASSIQPLNVPREWIWNLPRRTVHFGTSVSTIFKGFVCVRGFDQETRAPRPLMARLHFPANHGLVPGHLVWSGYDNNGVSRFVSSYRNTLLLLNSTSSTVILDNIMCNPNSQCIEQRNSAIKIESTNLRSRLVPHETREHLRDSKTSGIDRSPKEPNNQSLEEEIITSQNSLGSSITEAAKGIRSCSGSNSEAEGPTTDYKTLTPQEVRRSVDKSTEKQHGPLGSQELPTINPYEPLGMHLVHQQEIS 1774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0260 1774 MobiDBLite consensus disorder prediction 927 1003 - -
Dere01g0260 1774 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1170 1588 IPR044811 GO:0019104|GO:0035514|GO:0080111
Dere01g0260 1774 MobiDBLite consensus disorder prediction 380 397 - -
Dere01g0260 1774 MobiDBLite consensus disorder prediction 1659 1676 - -
Dere01g0260 1774 SMART endo3end 1136 1270 IPR003265 GO:0006284
Dere01g0260 1774 MobiDBLite consensus disorder prediction 1709 1774 - -
Dere01g0260 1774 MobiDBLite consensus disorder prediction 932 960 - -
Dere01g0260 1774 MobiDBLite consensus disorder prediction 352 420 - -
Dere01g0260 1774 MobiDBLite consensus disorder prediction 1112 1158 - -
Dere01g0260 1774 MobiDBLite consensus disorder prediction 1659 1687 - -
Dere01g0260 1774 MobiDBLite consensus disorder prediction 1122 1144 - -
Dere01g0260 1774 MobiDBLite consensus disorder prediction 1709 1731 - -
Dere01g0260 1774 SUPERFAMILY DNA-glycosylase 827 1293 IPR011257 GO:0003824|GO:0006281
Dere01g0260 1774 MobiDBLite consensus disorder prediction 667 688 - -
Dere01g0260 1774 SMART ccc3 1271 1291 IPR003651 GO:0051539
Dere01g0260 1774 Coils Coil 1391 1411 - -
Dere01g0260 1774 Coils Coil 289 309 - -
Dere01g0260 1774 MobiDBLite consensus disorder prediction 961 1003 - -
Dere01g0260 1774 Pfam Permuted single zf-CXXC unit 1485 1516 IPR028924 -
Dere01g0260 1774 Gene3D - 1193 1299 IPR023170 -
Dere01g0260 1774 Pfam RRM in Demeter 1523 1584 IPR028925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0260 Dere-ChrDere01 7010323 7025869 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0260 01 7010323 7025869 Dere02g1130 02 10795045 10804832 CCT
Dere01g0260 01 7010323 7025869 Dere01g0260 01 7010323 7025869 ECH