Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1126 ATGGATCGGCTTTCATCGACGACTATTCTTCCAGATGCGTTTCAAGGGGCCAGAGATGACATTACCCTGCAAATTGGATTGATTTGGAGTCAGATCAAAACCCCATTGATCGTTCCGCTTCTGAGAATAGCAGTCATTCTGTGCTTATTCATGTCGTTGTTGCTGTTTGTAGAGAGGGTGTATATGGGCGTTGTAATCATTTTGATAAAGCTGTTTGGGCGAAAACCAGAGAAGCGTTACAAATGGGAGCCAATGAAGGATGACGTAGAGTTGGGCAACTCTGCTTATCCAATGGTTCTCGTTCAAATTCCAATGTACAACGAAAGAGAGGTTTATCATCTGTCAATTGGAGCAGCATGTGGGCTTTCTTGGCCTTCAGACAGGATCATAATACAAGTTCTGGACGATTCCACGGACCCAACAATCAAGAGCTTGGTGGAGCTGGAATGCCAAAGATGGGCAAGCAAAGGGATAAACATAAAGTACGAGATTAGGGACAACAGAAACGGATACAAAGCAGGTGCTCTCAAAGAGGGCATGAAGCGAAGCTACGTGAAGCAGTGCGACTACGTTGCCATTTTCGATGCTGACTTTCAACCAGAGCCTGATTTCCTCTGGCGCACCATTCCTTTCCTTGTGCACAATCCGGAACTCGCCCTGATTCAGGCTCGCTGGAAGTTCGTGAATTCCGATGAATGTTTGATGACCAGGATGCAGGAGATGTCGCTGGATTATCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTACGCCTTCTTTGGGTTCAACGGGACTGCGGGTGTATGGAGAATTTCGGCGCTGAATGAGGCTGGTGGCTGGAAGGATAGGACCACGGTAGAAGATATGGACCTGGCTGTGAGAGCCAGTCTCAAAGGATGGAAATTCCTATACCTGGGCAATTTAAAGGTTAAAAACGAATTGCCAAGCACTTTCAAGGCCTATCGCTACCAACAGCATCGCTGGTCTTGCGGGCCAGCCAATCTTTTCAGGAAAATGGTAATGGAGATTATAACAAACAAGAAAGTTTCCTCGTGGAAGAAGGTACATGTGATTTACAGCTTCTTCTTCGTTCGGAAAGTCATAGCCCACATCAACACATTTGTATTTTATTGCATTGTATTACCTGCAACTGTTGTGGTGCCTGAGGTCGTGGTCCCCAAGTGGGGAGCTGTATACATCCCTTCCATCATCACCCTTCTTAATGCAGTTGGAACTCCAAGGTCACTGCACTTGCTAGTCTTCTGGATTCTCTTTGAGAATGTCATGTCTCTGCATCGAACAAAGGCAACAATTATTGGCCTGCTAGAGGCGAGTCGAGTGAATGAATGGATTGTCACTGAAAAACTTGGAGACGCTCTCAAAGCTAAAGCAGTCACTAAAGCATCCAAGAAGCCTCGATTCAGGATCGGAGACAGGATTCACTTGTTAGAGCTTGGGGTTGGATTTTACCTATTCTTCTGCGGGTGCTACGACTTCCTGTTTGGGAAAAACCACTACTTCATATTCCTTTTTCTCCAAGCAGTTGCCTTCTTCGTCATGGCGTTTGGATATGTTGGCACCATTGTTCCCAACTCCTAG 1602 0.46 MDRLSSTTILPDAFQGARDDITLQIGLIWSQIKTPLIVPLLRIAVILCLFMSLLLFVERVYMGVVIILIKLFGRKPEKRYKWEPMKDDVELGNSAYPMVLVQIPMYNEREVYHLSIGAACGLSWPSDRIIIQVLDDSTDPTIKSLVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKRSYVKQCDYVAIFDADFQPEPDFLWRTIPFLVHNPELALIQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGNLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEIITNKKVSSWKKVHVIYSFFFVRKVIAHINTFVFYCIVLPATVVVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKAKAVTKASKKPRFRIGDRIHLLELGVGFYLFFCGCYDFLFGKNHYFIFLFLQAVAFFVMAFGYVGTIVPNS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1126 533 Pfam Glycosyl transferase family group 2 190 388 IPR001173 -
Dere02g1126 533 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Dere02g1126 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 312 IPR029044 -
Dere02g1126 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 375 IPR029044 -
Dere02g1126 533 CDD CESA_CaSu_A2 97 333 - -
Dere02g1126 533 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 22 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1126 Dere-ChrDere02 10750317 10754067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1126 1 532 Miscellaneous Gene Families AT5G03760 81.614 0.0 942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0264 01 7064777 7071607 Dere02g1126 02 10750317 10754067 CCT
Dere02g1126 02 10750317 10754067 Dere07g0710 07 10455075 10459737 ECH
Dere02g1126 02 10750317 10754067 Dere02g1126 02 10750317 10754067 ECH