Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0264 ATGGATCCATTAATGACATCAACTGGTGTAGCATACGCCAATTTTGCAGGCAAAATGGGGTTGATATGGGAGCAAACTAGGGCTCCTCTGATAATTCCATTATTGAAAGTGATGGTGATAGTGTGCCTGGCGATGTCAGCGATGCTGTTTGTGGAGAGAGTGTATATGGGGATGGTGATAGTGCTTGTGAGGTTGTTTGGTCGCAAGCCTGAGAATCGATACAAGTGGGAGTCTCTTAAGGACGATGATGATGTTGAGCTTGGCAGCTCTCGCTACCCTATGGTGCTGGTGCAAATTCCTATGTACAATGAGATTGAGGTGTACCAGTTGTCAATAGGAGCAGCATGTGGATTATCATGGCCATCCGATAGAATCATCATTCAAGTTCTTGATGACTCCACTGATCCCCTCATCAAGAAATTGGTGGAGAATGAATGCAAGAGATGGGACAGCAAAGGGATAAACATAAAGTACGAGATAAGAGAGAACAGAAAAGGGTACAAAGCAGGGGCTCTGAAAGAAGGGATGAAGCACAGTTACGTCAAACTCTGTGACTACGTCGCCATCTTCGACGCCGACTTCCAGCCTGACCCTCATTTCCTCACCCACACCATTCCCTTCCTCCTTCACAACCCTCAAATTGCCCTCGTCCAAGCTCGCTGGAAATTCGTAAATGCTGATGAATGCTTAATGACAAGAATGCAAGAGATGTCATTGGATTACCATTTCATTGTTGAGCAGGAAGTTGGGTCCTCAACTTATGCTTTCTTTGGTTTCAATGGCACAGCTGGTGTTTGGAGGCTTTCTGCCCTAAATGAGGCTGGAGGATGGAAGGACAGAACAACTGTGGAAGACATGGACTTGGCTGTTCGAGCTGGTCTCAAGGGCTGGAAATTTTTGTACCTTGGTGACCTTAAGGTGAAAAATGAATTGCCAAGTACATTCAAAGCCTACCGTTATCAACAACACCGATGGTCTTGTGGCCCCGCTAATCTCTTCAGGAAAATGGCAATGGAAATCATAAGAAACAAGAAAGTATCAATGTGGAAGAAGTTCTATGTGATATACAGCTTTTTCTTTGTCAGGAAGATCATAGCCCATGTGGTGACATTTGTGTTTTACTGTGTTGTTTTGCCTGCAACTGTTCTAGTTCCCGAAGTGGAAGTTCCTAAGTGGGGTGCTGTTTATATACCTTCCACCATTACTCTTCTTAATGCTGTAGGAACTCCAAGATCACTCCACCTATTGGTATTCTGGATCCTATTTGAAAATGTCATGTCAATGCATCGGACTAAGGCAACACTGATAGGTTTGCTGGAGGCAGGGAGAGCAAATGAATGGGTGGTCACTGAGAAATTGGGAGATGCTCTTAAAACAAAATCAGGAGGCAAAGCACCAAGGAAGCCACGCGTAAGAATTGGTGAAAGAATCCATTTGCTGGAACTTGGTGTTGGGGCCTACCTCTTCATCTGTGGATGCTACGATCTAACCTTTGGGAAGAACCAGTACTTCATATACCTCTTCCCGCAATCTCTTGCCTTCTTTATTGCAGGGGTTGGCTACATTGGTGTCTTTGTTCCCAATTCTTAG 1590 0.4472 MDPLMTSTGVAYANFAGKMGLIWEQTRAPLIIPLLKVMVIVCLAMSAMLFVERVYMGMVIVLVRLFGRKPENRYKWESLKDDDDVELGSSRYPMVLVQIPMYNEIEVYQLSIGAACGLSWPSDRIIIQVLDDSTDPLIKKLVENECKRWDSKGINIKYEIRENRKGYKAGALKEGMKHSYVKLCDYVAIFDADFQPDPHFLTHTIPFLLHNPQIALVQARWKFVNADECLMTRMQEMSLDYHFIVEQEVGSSTYAFFGFNGTAGVWRLSALNEAGGWKDRTTVEDMDLAVRAGLKGWKFLYLGDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAMEIIRNKKVSMWKKFYVIYSFFFVRKIIAHVVTFVFYCVVLPATVLVPEVEVPKWGAVYIPSTITLLNAVGTPRSLHLLVFWILFENVMSMHRTKATLIGLLEAGRANEWVVTEKLGDALKTKSGGKAPRKPRVRIGERIHLLELGVGAYLFICGCYDLTFGKNQYFIYLFPQSLAFFIAGVGYIGVFVPNS 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0264 529 FunFam Glucomannan 4-beta-mannosyltransferase 9 84 312 - -
Dere01g0264 529 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 16 523 - -
Dere01g0264 529 SUPERFAMILY Nucleotide-diphospho-sugar transferases 90 370 IPR029044 -
Dere01g0264 529 Pfam Glycosyl transferase family group 2 186 379 IPR001173 -
Dere01g0264 529 CDD CESA_CaSu_A2 93 329 - -
Dere01g0264 529 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 84 309 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0264 Dere-ChrDere01 7064777 7071607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0264 18 528 Miscellaneous Gene Families AT5G03760 78.320 0.0 852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0264 01 7064777 7071607 Dere02g1126 02 10750317 10754067 CCT
Dere01g0264 01 7064777 7071607 Dere07g0710 07 10455075 10459737 ECH
Dere01g0264 01 7064777 7071607 Dere01g0264 01 7064777 7071607 ECH