Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1117 ATGCATTCTTCTCACTTGCTGCTTGAAGAACCTATAAGGATGGTCTCTATAATAGAGCCATCCAAGGCTAGTTTCTTCCCTGCATTAACAAAAATCGTTGGTACACTGGGTCCTGAATCTCGATCTGTAGACGTTATTTCTGACTGTCTCAAGGCTGGAATGTCTGTGGCTCGTTTCGACTTTTCGTGGGGTGACCCTGAGTTTCATCAGGAGACCTTGGAGAATTTGAAGACCGCTATCAAGAGTACTAAGAAGCTTAGTGCTGTTATGCTGGACACGGTAGGTGCAGAGATGCAGGTTGTTAACAAAAGTGAGAAATCTATATCCCTTCAGGCAGATGGTCTTGTTGTTCTAACTCCAGACAAGGGACAGGAGGCCTCTTCAGAGATATTGCCCATCAATTTTGATGGACTAGCAAAGTCAGTGAAGAAGGGAGATACCATTTTTGTTGGTCAATACTTGTTCACCGGAAGTGAAACTACTTCTGTATGGCTAGAGGTTGCTGAAGTCAATGGACAAGATGTTGTTTGCGTTATAAAAAACTCAGCAACATTGGCTGGCGCATTGTTCACTTTGCATGCCTCTCAAATTCATATTGATTTGCCCACTCTTACTGAGAAAGACAAGGAGGTTATAAGCACTTGGGGAGTGAGAAACAAAATTGATTTTCTATCATTGTCATATACTCGGCATGCAGAAGATGTTCGTGAGGCTCGCCAGTTCCTTTCCAAGTTAGGTGATCTCAGCCAGACTCAGATTTTGGCAAAGATTGAAAATATTGAGGGATTGACCCATTTTGATGAGATCCTACAAGAAGCTGATGGAATTATCCTTTCCCGCGGGAATTTGGGTATTGATCTTCCACCTGAGAAGGTATTTTTATTTCAAAAATCTGCTCTTTACAAGTGTAACATGGCTGGGAAACCTGCTGTGCTCACACGTGTTGTGGATAGCATGACTAGCAACTTAAGACCAACTCGTGCAGAAGCCACTGATGTTGCCAATGCTGTTTTGGATGGAAGTGATGCAATACTCCTGGGTGCGGAGACCCTACGTGGTTCATATCCTGTTGAGACTATTTCTACTGTTGGCAAAATTTGTGCTGAGGCTGAGAAAGTTTTCAACCAAGACCTCTATTTTAAAAAGACTGTCAAATATGTTGGAGAACCGATGACCCACTTGGAATCCATTGCATCCTCTGCGGTGCGGGCAGCTATTAAGGTGAAGGCTTCTGTTATCATTTGCTTCACTTCAACCGGAAGGGCTGCAAGATTAATAGCAAAGTATAGGCCTACAATGCCCGTTCTCTCTGTTGTGATCCCTCAAATCAAGACAAATCAGCTAAAGTGGAGCTTTACTGGAGCCTTTGAGGCAAGGCAATCGCTTATAGTGAGAGGTCTCTTTCCCATGCTTGCGGATCCCCGACATCCTGCGGAGTCAACAGGGGCAACGAACGAGTCCATTCTGAAGGTTGCCCTTGATCATGGAAAAGCGTCAGGAGTTATAAAGTCGCATGATCGAGTTGTTGTTTGCCAGAAAGTTGGTGATGCATCCGTTGTTAAGATTATTGAGCTTGAAGATTAA 1584 0.4381 MHSSHLLLEEPIRMVSIIEPSKASFFPALTKIVGTLGPESRSVDVISDCLKAGMSVARFDFSWGDPEFHQETLENLKTAIKSTKKLSAVMLDTVGAEMQVVNKSEKSISLQADGLVVLTPDKGQEASSEILPINFDGLAKSVKKGDTIFVGQYLFTGSETTSVWLEVAEVNGQDVVCVIKNSATLAGALFTLHASQIHIDLPTLTEKDKEVISTWGVRNKIDFLSLSYTRHAEDVREARQFLSKLGDLSQTQILAKIENIEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALYKCNMAGKPAVLTRVVDSMTSNLRPTRAEATDVANAVLDGSDAILLGAETLRGSYPVETISTVGKICAEAEKVFNQDLYFKKTVKYVGEPMTHLESIASSAVRAAIKVKASVIICFTSTGRAARLIAKYRPTMPVLSVVIPQIKTNQLKWSFTGAFEARQSLIVRGLFPMLADPRHPAESTGATNESILKVALDHGKASGVIKSHDRVVVCQKVGDASVVKIIELED 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1117 527 SUPERFAMILY PK beta-barrel domain-like 103 186 IPR011037 -
Dere02g1117 527 PANTHER PYRUVATE KINASE 28 512 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere02g1117 527 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere02g1117 527 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere02g1117 527 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere02g1117 527 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere02g1117 527 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere02g1117 527 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere02g1117 527 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
Dere02g1117 527 Pfam Pyruvate kinase, alpha/beta domain 395 522 IPR015795 -
Dere02g1117 527 Gene3D - 30 362 IPR040442 -
Dere02g1117 527 FunFam Pyruvate kinase 96 202 - -
Dere02g1117 527 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 7 375 IPR015813 GO:0003824
Dere02g1117 527 SUPERFAMILY PK C-terminal domain-like 358 520 IPR036918 -
Dere02g1117 527 NCBIfam pyruvate kinase 30 516 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere02g1117 527 Gene3D - 363 525 IPR036918 -
Dere02g1117 527 FunFam Pyruvate kinase 371 513 - -
Dere02g1117 527 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1117 Dere-ChrDere02 10675124 10681273 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0273 01 7146419 7157061 Dere02g1117 02 10675124 10681273 CCT
Dere02g1117 02 10675124 10681273 Dere02g1117 02 10675124 10681273 ECH