Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0273 ATGGCTTCAATTCTCGAGCCATCCAAGCCTGGTTTCTTTCCGGCAATGACGAAGATTGTTGGTACACTTGGTCCAAATTCAAGATCTGTTGATACTATTTCGCGTTGCCTTGAATCAGGAATGTCTGTGGCGAGGTTTGATTTCTCATGGGGTGATCCTGAATACCACCAAGAGACATTAGAAAATTTAACGGCTGCTATCAAAAGAAGCAAGAAACTCTGTGCGGTTATGCTAGATACTGTGGGTCCAGAGTTGCAAGTAGTGAATAAAACTGAGAACCCAATTTCCCTTCAAGCAGATACATTAGTTGTCTTAACTCCAGATCAAGACAGAGTAGCTACTTCAAATCTCTTACCAGTTAACTTTAATGGGCTATCAAAGGCAGTGAAGAAGGGTGATGCCATGTTTATTGGTCAATATTTGTTTACAGGAAGTGAAACAACTTCTGTGTGGCTGGAGGTCAGTGAGGTGGATGGTGATGATGTCATTTGTCTCATAAAGAATTCTGCAACTCTAGCAGGGTCATTATATACATTACATGTTTCTCAGATTCACATTGATCTTCCTACACTTACCAATAAGGATAAGGAGGTAATAAGCACATGGGGTGTTCGAAACAATATAAACTTCCTTTCATTATCATACACCCGACATGCTGAAGACATTCGCCATGCCCGTGAGTTCCTCTCTAAGTTAGGTGATCTCAACCAGACACAGATTTTTGCAAAGATTGAAAATGTGGAGGGATTGACCCATTTTGATGAGATACTGAGAGAAGCAGATGGTATCATTCTCTCCCGTGGAAATTTGGGGATAGATCTCCCACCTGAGAAGGTATTTTTATTTCAGAAAGCTGCTATTTACAAGTGCAATATGGTTGGAAAGCCAGCTGTTGTCACACGTGTTGTGGACACTATGACAGATAATCTAAGACCTACTCGCGCTGAAGCAACTGATGTTGCAAATGCTGTTTTGGATGGGAGTGATGCCATTCTTCTTGGGGCAGAAACCCTGCGGGGATTATACCCTGTAGAGACAATTTCTATTGTTAGAAAAATTTGTGCTGAGGCGGAGAAAGTTTATAATCAAGATTTGTATTTCAAGAAGGCTGTCAAATATGTGGGAGAGCCAATGACCCACTTGGAATCAATAACTTCCTCTGCGGTTCGAGCAGCCATCAAGGTTAAGGCTTCTGTTATTATCTGCTTCACTTCATCTGGAAGAGCTGCAAGGTTGATTGCAAAGTACAGGCCAACCATGCCTGTGATATCTGTTGTCATTCCTCGACTGAAGACAAATCAACTCCGATGGACGTTTACTGGTGCTTTTGAGGCAAGACAATCGCTTATCGTCAGAGGTCTTTTCCCTATGCTTGCAGATCCACGGCATCCGGCTGAGTCTAAAAGTGCGACAAATGAATCAATTTTGAAAGTTGCATTAGACTACGGTAAGGCCTCCGGCGTCATAAAGCCTCATGACCGAGTTGTTGTTTGCCAGAAAGTTGGAGACTCATCAGTTGTGAAGATTATTGAGCTTGAAGATTAG 1545 0.4227 MASILEPSKPGFFPAMTKIVGTLGPNSRSVDTISRCLESGMSVARFDFSWGDPEYHQETLENLTAAIKRSKKLCAVMLDTVGPELQVVNKTENPISLQADTLVVLTPDQDRVATSNLLPVNFNGLSKAVKKGDAMFIGQYLFTGSETTSVWLEVSEVDGDDVICLIKNSATLAGSLYTLHVSQIHIDLPTLTNKDKEVISTWGVRNNINFLSLSYTRHAEDIRHAREFLSKLGDLNQTQIFAKIENVEGLTHFDEILREADGIILSRGNLGIDLPPEKVFLFQKAAIYKCNMVGKPAVVTRVVDTMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVRKICAEAEKVYNQDLYFKKAVKYVGEPMTHLESITSSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPRLKTNQLRWTFTGAFEARQSLIVRGLFPMLADPRHPAESKSATNESILKVALDYGKASGVIKPHDRVVVCQKVGDSSVVKIIELED 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0273 514 Gene3D - 83 189 IPR015806 GO:0004743|GO:0006096
Dere01g0273 514 PANTHER PYRUVATE KINASE 15 499 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere01g0273 514 Gene3D - 17 335 IPR040442 -
Dere01g0273 514 PRINTS Pyruvate kinase family signature 267 291 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere01g0273 514 PRINTS Pyruvate kinase family signature 72 88 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere01g0273 514 PRINTS Pyruvate kinase family signature 208 222 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere01g0273 514 PRINTS Pyruvate kinase family signature 335 351 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere01g0273 514 PRINTS Pyruvate kinase family signature 240 266 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere01g0273 514 PRINTS Pyruvate kinase family signature 316 334 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere01g0273 514 Gene3D - 336 512 IPR036918 -
Dere01g0273 514 Pfam Pyruvate kinase, alpha/beta domain 382 506 IPR015795 -
Dere01g0273 514 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 7 363 IPR015813 GO:0003824
Dere01g0273 514 Pfam Pyruvate kinase, barrel domain 17 361 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere01g0273 514 NCBIfam pyruvate kinase 17 503 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Dere01g0273 514 SUPERFAMILY PK C-terminal domain-like 345 509 IPR036918 -
Dere01g0273 514 FunFam Pyruvate kinase 83 189 - -
Dere01g0273 514 SUPERFAMILY PK beta-barrel domain-like 83 173 IPR011037 -
Dere01g0273 514 FunFam Pyruvate kinase 358 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0273 Dere-ChrDere01 7146419 7157061 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0273 01 7146419 7157061 Dere02g1117 02 10675124 10681273 CCT
Dere01g0273 01 7146419 7157061 Dere01g0273 01 7146419 7157061 ECH