Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0978 ATGGTTCTCCCCAATCCTCATGTTTTATTGTCATTCAGAGTGCAGATTTACTTTTTCATTATTTACAGAGAAACGCTGTATTTTTGGAGATATCGTAATTGCTATACCTGGCTCCCTCCTCTCGTATTCCCCCCTCCTGATTCCTTTCCCCGAATGCGATTTGTAGATGAGACTAATTCTATAAAGGATCGGGTGCTTGCTATATTGCTGCTACAACTGGCAATTCCAAAATCACAGTTCAGAAACTTTTTAAGCCAAAATATCTTCATGGTAGCTACCGGTGGGCAATTTTCAAATGGCAACAACTGGTTCGTTTTACAGGGTCTGCAGAAAATGGGGTCTCTAGAAAGATCAAAGAAGAGAGTTCAGTTATGGAAGAAAGCCATGATCCATTTCTCTCTATGTTTTGTGATGGGGTTCTTCACAGGCTTCGCTCCAACAGGCAAATCTTCACTAGTTTCTACTCAAGCTGCTTCTGCTTCCAATAGAACAGAATTTGCGCCACAACCTATTGAAATGACAACAAATGTCAATAGAAGTTTGATAGCTCCAACGTCGGTGGCCATACCGACAAGGTCTAGAGTCCCCAAACACAACACCAAGTTACATACACAAGCAGAGCCCAATTTGAAGCCCGGAAGACACCTCATCGTTGTCACTCCAACAAGCACAAGAATTCCCTTTCAAGCAGTGTTCTTGAGGAGGTTGGCGAATACTATAAAGTTGGTTCCTCAGCCATTGTTGTGGATTGTTGTGGAACCACAAACAGAGTCCACACAACTGTCTGAGATACTTAGGAAAACAGGTACTATGTACAGACATTTAGTGTCCAAGGAAAACTTCACCGACTTGGACGCTGAGCTGAATCACCAGAGAAATCTTGCTCTCAAGCACATCGAACACCATAGGCTAAGTGGGATTGTACACTTTGCTGGGCTTTCCAATGCTTATGATCTTGAATTCTTCCACCATCTTAGAGATATTGAGGTGTTTGGAACATGGCCAGTCGCACTACTAGCAGCAAACAGGAAGAAAGTAATAATCGAAGGACCTGTTTGTGATTCTTCACAAGTTATAGGTTGGCATTTGAGGAATATGAACAATGATACTGACACTATCACTCCTCCTATTCATATTTCAAGTTTTGCATTCAACAGTTCCATTCTCTGGGATCCTGAAAGATGGGGTCGCACTTCTTCTGTTCAAGACACCTCGCAGAACTCAATCAAGTTCGTGAAGCAAGTAGTACTAGAAGATGAATCCAAGTTAAATGGAATTCCACCTGAGGGCTGCTCCAGAATCATGCTCTGGCGTTTCAATTTTCATGCTCCTATCACTTCAAGATATCACATTCTAACTACTATATCCAAGGGTGACCCCAGATAA 1386 0.4221 MVLPNPHVLLSFRVQIYFFIIYRETLYFWRYRNCYTWLPPLVFPPPDSFPRMRFVDETNSIKDRVLAILLLQLAIPKSQFRNFLSQNIFMVATGGQFSNGNNWFVLQGLQKMGSLERSKKRVQLWKKAMIHFSLCFVMGFFTGFAPTGKSSLVSTQAASASNRTEFAPQPIEMTTNVNRSLIAPTSVAIPTRSRVPKHNTKLHTQAEPNLKPGRHLIVVTPTSTRIPFQAVFLRRLANTIKLVPQPLLWIVVEPQTESTQLSEILRKTGTMYRHLVSKENFTDLDAELNHQRNLALKHIEHHRLSGIVHFAGLSNAYDLEFFHHLRDIEVFGTWPVALLAANRKKVIIEGPVCDSSQVIGWHLRNMNNDTDTITPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVLEDESKLNGIPPEGCSRIMLWRFNFHAPITSRYHILTTISKGDPR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0978 461 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 123 442 IPR005027 GO:0015018|GO:0016020
Dere02g0978 461 SUPERFAMILY Nucleotide-diphospho-sugar transferases 214 455 IPR029044 -
Dere02g0978 461 FunFam Glycosyltransferases 214 454 - -
Dere02g0978 461 Pfam Glycosyltransferase family 43 236 440 IPR005027 GO:0015018|GO:0016020
Dere02g0978 461 CDD GlcAT-I 216 441 IPR005027 GO:0015018|GO:0016020
Dere02g0978 461 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 215 456 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0978 Dere-ChrDere02 9260537 9265253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0978 112 441 Glycosyltransferase AT2G37090 60.756 3.72e-146 419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2908 01 43792492 43795330 Dere02g0978 02 9260537 9265253 CCT
Dere02g0978 02 9260537 9265253 Dere02g0978 02 9260537 9265253 ECH