Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0922 ATGGAGCCTCTGGCTAAACTGCGTCACTATCACCAACCGCTTCACCTCTCACTCAATCACCATCCTTCTTCATTATCAAGACCCTTGATGTCCGTCTCCTTTAGGTCTCTACCGCTTCCGGCTTCACCACCGCAATTTTCCGCTTCGTCCTTCAGGTTATCGCCCATTAGAGCGGCATCCGCGCAGTCTAACTCGTCCACTGACCCTCCTTTCCGTAAACCCGCACAGTTGCTCCAAACACTAAACCCTCTTTTCTCAGCTGTCGTTCAAACCACATGTACCATCACAGTAGCGGCTGTGTTTTTCTTCACGCGTCTTCAGCATAACCCCGCCATTGCAGCTCCGCTTGTGCCACCCACGGTGGAGCCCAGTACGGAGTCGAAGGAAAATTCTTCGAATGAAGAAAACGAAAGAATTATTGAAGGGCAATTAAGCAACAATCCGAATGATACCGATGCTCTTAAGTCTCTCATCGAGGTCAAGATCAGAGCGCGCAAACTTGAGGAAGCAATTCAGGTTATAGACCGTTTGGTTGAAGTCGAACCAGAAGAGCTTGAGTGGCCTCTGCTGAAGGCTCACATGTATATCTATAACGGTGACTACGAATTAGCCAAAGAGAAGTTTGAAGATATTCTAACGAAAGATCCCTATCGTGTTGAAGCCTATCATGGCCTAGTAATGGCAACTTCGGAATCGGAGAAGCCATTGGACGGTTTGTTAAAGAGGGTTGAAGAAGCAGTGGAATTGTGCAAAAAACAAAAGCGGGAATCAGAAGTCAGGGATTTGAAGCTCTTGATTGCGCAGATAAAAGTCATGGAGGGGGAGTTTTCTGATGCACTGAAGGCTTATCAGGAGCTTGTAAAGGAAGAACCAAGAGATTTCAGGCCGTACTTGTGTCAGGGTATCATATATACCCTTCTAAGAAAGAGAGATGAAGCCGAAAAACAATTTGACAAGTTCCGGAGGCTTATCCCTAAGAACCATCCTTATAGAGAGTATTTTGAGGATAATATGTTTGCAATGAAGTTTTCTCCACAGAAGGTAGAGAGGGAGGGAGCAGCTGAGCCTGGACTAATGACTTCATCCACAACAACACATATTAGGGACTCCAATCTATCTGCGTCCAGTTCTGATAAATACTTTGGTTCTCTAATAATTGCTTTACTCTGTGCCCTCAAGTCGACTCTGAATGATGGATAG 1200 0.4567 MEPLAKLRHYHQPLHLSLNHHPSSLSRPLMSVSFRSLPLPASPPQFSASSFRLSPIRAASAQSNSSTDPPFRKPAQLLQTLNPLFSAVVQTTCTITVAAVFFFTRLQHNPAIAAPLVPPTVEPSTESKENSSNEENERIIEGQLSNNPNDTDALKSLIEVKIRARKLEEAIQVIDRLVEVEPEELEWPLLKAHMYIYNGDYELAKEKFEDILTKDPYRVEAYHGLVMATSESEKPLDGLLKRVEEAVELCKKQKRESEVRDLKLLIAQIKVMEGEFSDALKAYQELVKEEPRDFRPYLCQGIIYTLLRKRDEAEKQFDKFRRLIPKNHPYREYFEDNMFAMKFSPQKVEREGAAEPGLMTSSTTTHIRDSNLSASSSDKYFGSLIIALLCALKSTLNDG 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0922 399 SUPERFAMILY TPR-like 148 328 IPR011990 GO:0005515
Dere02g0922 399 Pfam Tetratricopeptide repeat 272 325 - -
Dere02g0922 399 Coils Coil 236 260 - -
Dere02g0922 399 Gene3D Tetratricopeptide repeat domain 118 339 IPR011990 GO:0005515
Dere02g0922 399 SMART tpr_5 151 184 IPR019734 GO:0005515
Dere02g0922 399 SMART tpr_5 185 218 IPR019734 GO:0005515
Dere02g0922 399 SMART tpr_5 294 327 IPR019734 GO:0005515
Dere02g0922 399 SMART tpr_5 260 293 IPR019734 GO:0005515
Dere02g0922 399 ProSiteProfiles TPR repeat profile. 260 293 IPR019734 GO:0005515
Dere02g0922 399 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 51 330 - -
Dere02g0922 399 MobiDBLite consensus disorder prediction 115 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0922 Dere-ChrDere02 8823005 8824612 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2971 01 44231882 44235536 Dere02g0922 02 8823005 8824612 CCT
Dere02g0922 02 8823005 8824612 Dere02g0922 02 8823005 8824612 ECH