Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2971 ATGGAGTCTCTGGCTAAATTGCACCACTCTCGCCAACCATTGCATCTTTCAACTACCTATGACCCTTCGTCATTCTCAAGACCCTTATCTTCGGTCTCCTTCAGGTCTCTACCACCACCGGCTTCGCCATTGCAATTTTCATCTTCATCCTTCAGGTATTCATCTATCAGAGCCTCTTCCTCGTCGTCAACCTCATCCACCGACCCCTCATTTCAAAAGCCCGGAGACATTTTAACCCGTCTGCTCGAAACCCTAAATCCCCTTTTGTCACCTGCTGTCGAAACTATTTGCATCACTATAGCAGCGTCGGCATTTTTCTTCTTGCGTTTTCATCACATGCCTGTTATTGCAGCTCCGGTTGCGACACCCACGGTGGAGTCCATCGAAGAGTCGACGGATAAACTTTCGAATGAAGAAAAGGAGAGAATTATTCAAGAGAAATTGAACAACAATCCCAATGATACGGAAGCTCTTCGGTCTCTCATGGAGATTAAGATCAGAGCGCGTAAAATTGAAGAGGCGATTCAGGTTATAGACCGTTTGATTGAACTGGAACCCCAAGAGTTTGAGTGGCCACTTATGAAGGCTCACATGCATATCTATAATGCCAAGTACGAATTGGCCAAAAATGAGTTCGAAGATATTCTGAAGAAAGATCCATGTCGTGTTGAAGCTTATCATGGCCTTGCAATGGCAACTTCGGAATCAAATAAGCCATTGAAGGGCTTGGTGAAGAGGGTTGAAGAAGCAGTGGAGTTGTGCAAAAAGGGAAAGAGGAATTCGGATGTCAGAGACTTAAAGCTATTGATTGCGCAGATTAAAGTCATGGAAGGATACTTTTCTGATGCGCTGAAGGCCTATCAGCAGCTTGTGAAGGAAGAACCCAGAGATTTTAGGCCGTACTTATGTCAGGGTATCATATATACTCTGCTAAGAAAGAAAGATGAAGCTGAGAAACAATTTGAGAAGTTCCGGAGGCTCGTCCCAAAGAATCACCCTTATAAAGAGTATTTTGAGGATAATATGTTTGCAACTAAGTTTTTCTCACAGAAGTTTGAGAGGGAAGGAGCTGCTGATTCCATGAAGGAAATGCATGATGATCTGGATACCTCTCCTCAAGCGGAGGCTTCGGTGGAAGGTGAGCTGGCAACCCCCATTTACGTATGTCCTTGTGAAGAGGGAAGAGTGTCAACAGTGATGAAAAAACAAGAAGAGAGGGAGAGAGAGAGAGAACAACAAGAGGAGCAACAAAGACAGAGCAACACATTGAACAAGAGGAGGAGGAACCTCAATGATGTCTTGAGGAGAGAAAAAGGGAAAAACAGGAACAACAGAGAGAGCAACCAACCTGAAGGAGAAAGACGATACAGAAAGCTTACAGTGGGAAAAGAAAGAAGAAAAGCCAAGAAAACAGATTCCAAAAAGCAATCCCACCTTCTCTTTTGCAATGTAGCTCCCATGTGCTGCCCGTCCTCTCTTCTCTTCTTTCTCCTGCATTCTTCGGCATTCCTGTCACTTGCTGCACCTTCCAATTTCATATATGGCTTGGAAGATGTGTCACCATGGGATGCATCCGCGAACTGA 1584 0.4457 MESLAKLHHSRQPLHLSTTYDPSSFSRPLSSVSFRSLPPPASPLQFSSSSFRYSSIRASSSSSTSSTDPSFQKPGDILTRLLETLNPLLSPAVETICITIAASAFFFLRFHHMPVIAAPVATPTVESIEESTDKLSNEEKERIIQEKLNNNPNDTEALRSLMEIKIRARKIEEAIQVIDRLIELEPQEFEWPLMKAHMHIYNAKYELAKNEFEDILKKDPCRVEAYHGLAMATSESNKPLKGLVKRVEEAVELCKKGKRNSDVRDLKLLIAQIKVMEGYFSDALKAYQQLVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPKNHPYKEYFEDNMFATKFFSQKFEREGAADSMKEMHDDLDTSPQAEASVEGELATPIYVCPCEEGRVSTVMKKQEEREREREQQEEQQRQSNTLNKRRRNLNDVLRREKGKNRNNRESNQPEGERRYRKLTVGKERRKAKKTDSKKQSHLLFCNVAPMCCPSSLLFFLLHSSAFLSLAAPSNFIYGLEDVSPWDASAN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2971 527 MobiDBLite consensus disorder prediction 400 472 - -
Dere01g2971 527 Gene3D Tetratricopeptide repeat domain 120 350 IPR011990 GO:0005515
Dere01g2971 527 MobiDBLite consensus disorder prediction 400 422 - -
Dere01g2971 527 PANTHER CELLULOSE SYNTHASE OPERON PROTEIN C 127 255 - -
Dere01g2971 527 ProSiteProfiles TPR repeat profile. 155 188 IPR019734 GO:0005515
Dere01g2971 527 SMART tpr_5 298 331 IPR019734 GO:0005515
Dere01g2971 527 SMART tpr_5 155 188 IPR019734 GO:0005515
Dere01g2971 527 SMART tpr_5 264 297 IPR019734 GO:0005515
Dere01g2971 527 MobiDBLite consensus disorder prediction 428 459 - -
Dere01g2971 527 MobiDBLite consensus disorder prediction 358 372 - -
Dere01g2971 527 SUPERFAMILY TPR-like 152 332 IPR011990 GO:0005515
Dere01g2971 527 MobiDBLite consensus disorder prediction 358 379 - -
Dere01g2971 527 Coils Coil 396 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2971 Dere-ChrDere01 44231882 44235536 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2971 01 44231882 44235536 Dere02g0922 02 8823005 8824612 CCT