Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0879 ATGTCGCACTTTACTGCACAACCGAGCCCGTTGAACAGCAACACACGCTGTGTACCGCTCTCTGTGGACTCGATAGCCAATCCTGTAACCCCTCATCCAGATCTGAACTCGCTCGCACCAGATCCAACCCGTCTCCGGAATTCATCAATGGAGGAAGCGCTGGAACTTGCACGCGCCAAAGACACTAAGGAGAGGATGGCCGGCGTGGAGCGCCTTTATCAACTATTGGAAGCTTCCAGAAAGAGCCTCACTTCATCTGAGGTTACTTCCCTTGTCGATTGTTGCTTGGATCTTATGAAAGATAACAACTTCAGGGTCTCTCAGGGTGCCCTTCAAGCTTTAGCCTCTGCCGCCGTCCTCTCCGGCGATCATTTCAAACTTCACTTCAATGCGCTTGTTCCCGCCGTCGTCGACCGCTTAGGCGATGCCAAACAGCCTGTTCGTGACGCCGCTAGAAGACTCTTGCTCACTCTTATGGAGGTTTCTTCCCCTACAATAATTGTTGAACGAGCAGGATCCTTTGCTTGGACACACAAAAGCTGGAGAGTTAGAGAGGAGTTTGCGCGAACTGTCACGTCTGCAATTGGTTTATTTTCATCTACTGAGCTTACTCTTCAACGCGCAATTCTTCCTTCAATTTTGCAGTTGCTGAATGATCCAAATCCTGGCGTAAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCTCAAGCTGGTCCTCAATTTCGTGATGAACTTCAGCGCCACAGCCTTCCTTCCTCTTTGGTAAAAGATATTAATGCTAGGCTAGAGGGCATTCAACCAAAAGTTCGTTCTTCTGATGGTATACCAGGTGGCTTTGTTACTGGAGAAATTAAACCTTTGAGCTTTAATTCCAAGAAAAGTAGCCCAAAAGCTAGAAGTTCATCGAGAGAGAACTCTATTTTTGGAGGAGATGGCGATATCACTGAGAAACCCATAGATTCTATCAAGGTGTGCTCAGAGAAGGAGTTCATCAGGGAAATTGATAAGATTGCATCAACCCTTGTACCAGAAAAGGACTGGTCAATTCGTATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTTTGGGAGGTGCTGCTGACTATCCATGTTTTCGAGGACTCCTGAAACAACTTGTTGGTCCTTTAAGCACCCAATTATCAGATCGAAGGTCTAGCATTGTGAAGCAGGCTTGCCATCTATTGTGCTTTTTGTCTAAGGAACTCTTAGGTGATTTTGAAGCTTGTGCTGAAATGTTTATACCAGTCCTTTTCAAGTTGGTTGTGATTACTGTACTGGTAATTGCAGAGTCTGCAGACAACTGCATAAAGACGATGTTGCGTAACTGCAAAGTTGCTCGGGTGCTTCCTCGTATAGCAGATTGTGCAAAAAATGATCGCAGTGCAGTTCTTCGTGCAAGGTGTTGCGAATACGCTCTATTGATATTAGAACAATGGCCTGATGCACCAGAAATACAGCGATCAGCTGATTTATATGAGGATCTGATAAGGTGTTGTGTTTCAGACGCAATGAGTGAGGTACGATCTACTGCAAGGATGTGTTATAGAATGTTCGCAAAAACTTGGCCAGAATGTTCTCGTCGCTTATTTTCATCCTTTGACCCTGTTATTCAAAGGTTAATAAATGAAGAGGATGGAGGAATACATAGGCGACATGCTTCACCTTCCGTTCGTGACAGAGGTGCACTGTCATTAACTAGTCAAGCCTCTGCTCCTTCTAATTTACCTGGATATGGAACTTCTGCTATTGTTGCAATGGACAGAAGTTCATCTTTATCATCAGGGACATCTGTATCCTCTGGTGTACTTCTTTCGCAGGCAAAATCACTTGGTAAAGGCACAGAACGTAGTTTGGAAAGTGTGTTGCATGCTAGCAAGCAGAAGGTCACTGCTATTGAAAGCATGCTTAGAGGTTTGGATTTGTCTGATAAGCATAATTCTGCTCTTCGGTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCCGCTTCTGTCCCAGCATCTAATCATCTGACAAACTCATTAACCACAGAATCAATAGTTTCTGGTGTCAATAAAGGTAGTAACCGAAATGGTGGTTTGGGTTTGTCAGACATAATTTCGCAAATTCAAGCTTCCAAAAACTCCAGTAAGTTATCATATCATAGTAATGCTAGTGAGCCTTTATCAGCATTTTCATCATACTCAAGTAAAAGGTCTTCTGAAAGATTACAAGAAAGAAATTCCGTTGATGACAACGGCGACTTTAGGGAGGCTAGGCGGTTTATGAACTCCCACATTGATAGGCAGTATTTGGATACAACTTATAGAGATGGAAACTTCAGGGATTCACAGAATAGTTATGTGCCTAATTTCCAGAGGCCACTATCAAGAAAGAATGTAACTGGACGTATGTCTGCTGGCAGAAGGAGAAGTTTTGATGATAGCCAGCTTTCTCTTGGAGAGATGTCAAATTATACTGATGGACCTACATCTCTCCATGAAGCTCTGAGTGAAGGACTTAGTTCAGGTTCCAACTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCACTCCTTGCTACAGCAAGGTCCGAAGGGAATTCAAGAAGTGGTCCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCACCATAAAGTTGCACAGGCTGCTCTTTCAACACTCGCAGATATTATTTCAGCATGTCGAAAGCCCTTCGAGAGTTACATGGAAAGAATATTACCCCATGTGTTTTCTCGCTTAATTGACCCAAAAGAGCTTGTTAGGCAAACATGCTCAGCGACTTTGGAAGTTGTTAGCAAAACTTACAGTATAGATTCTCTCTTACCTGCAGTACTACGCTCACTTGATGAACAGAGGTCTCCAAAGGCAAAATTGGCTGTTATAGAGTTTGCAATCAGTTCCTTTAACAAGCATTCAATGAATCAAGAAGGTGCTGCAAATACTGGCATTCTGAAATCATGGCTTGCCAAGTTAACTCCACTGGTTCATGACAAGAATACAAAGCTTAAAGAAGCCGCCATTACTTGCATTATATCAGTGTACTCTCACTTTGATTCGGCAGCACTTCTGAATTTTATTCTTAGTTTGTCAGTTGAAGAACAAAATTCGTTGAGGCGTGCCCTTAAACAGTACACTCCTCGCATTGAAGTTGACCTAATGAACTATCTGCAGAACAAGAAAGAGCGACAACGTTCTAAGTCCTCCTATGATCCATCTGATGTTGTTGGAACATCCTCTGAAGAAGGATATGTTGGTTTTTCAAGGAAAGCTAATTACCTTGGAAAGTATTCTGCTGGTTCTCTGGATAGTGATGGTAATATGAAGTGGAGTTCCCAAGATTCAACCCTGGTTAAAGCCAGTCATTACCAAGCAGCTTCTGGTGACAACCAGGAACTTTCATATCAAAATCATGATAATGATTCTACTAGTGGTATTCTAGGTTCAAAAACTAAAGATCTTGCTTATGCAGTCAATTCAATTGGCCAAAATTTTGTTTCTCATAATAGCCAACTTGGACATTCAGATAGTAGCATGAACTTTGAGGGTCTATCAACTCCTCATCTGGATGTTAATGGTCTAATGTCCTTAGAACATTTAACTTTAAATGTTGTCGAAGGATTTGGACATGAAAAAGAACATCCTTTGGAACTGGACCTGAATCATCACTCAACTGAAGCTGTGAAGACTAACTCCTTGAAAGATGCAGAGCCTGGCATTCCTCAAATTCTTCACCTGATATGCAAGGAGGGTGATGGAAGTCCTATATCAGGCAAGCGGACTGCACTTCAACAGTTAATTGGAACTTCCACAGCAAATGATCATTCTATTTGGACTAAGTACTTTAATCAGATTTTGACAGTTGTGCTTGAGGTGTTGGATGATTCAGACTCCACAGTTAGAGAGCTTGCTCTTTCACTAATAGTTGAAATGCTTAAAAACCAGAAAGATGCCATGGAAGATTCTGTTGAGATTGTAATTGAAAAGCTGCTTCATGTTACAAAGGATATTGTTCCCAAGGTCTCAAATGAAGCAGAGCACTGCCTGACTATTGTCTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTTATTGTACCTTTACTGGTTACTGAGGATGAGAGAACTCTTGTTACTTGCATAAATTGCTTGACAAAGCTTGTTGGCCGGCTTTCACAGGAAGAACTGATGGCTCAGTTACCATCCTTTTTGCCTGCTCTTTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTCCGTAAGACCGTTGTTTTCTGTCTTGTGGATATATATATCATGCTTGGGAAAGCATTCTTACCATACTTGCAAGGGCTAAATAGCACACAGTTGAAGTTGGTTACCATTTATGCAAATCGAATCTCACAGGCCAGGACAGGCACACCCATCGATGCCGCCTCTCATGATTAG 4488 0.424 MSHFTAQPSPLNSNTRCVPLSVDSIANPVTPHPDLNSLAPDPTRLRNSSMEEALELARAKDTKERMAGVERLYQLLEASRKSLTSSEVTSLVDCCLDLMKDNNFRVSQGALQALASAAVLSGDHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTHKSWRVREEFARTVTSAIGLFSSTELTLQRAILPSILQLLNDPNPGVREAAILCIEEMYAQAGPQFRDELQRHSLPSSLVKDINARLEGIQPKVRSSDGIPGGFVTGEIKPLSFNSKKSSPKARSSSRENSIFGGDGDITEKPIDSIKVCSEKEFIREIDKIASTLVPEKDWSIRIAAMQRVEGLVLGGAADYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRSAVLRARCCEYALLILEQWPDAPEIQRSADLYEDLIRCCVSDAMSEVRSTARMCYRMFAKTWPECSRRLFSSFDPVIQRLINEEDGGIHRRHASPSVRDRGALSLTSQASAPSNLPGYGTSAIVAMDRSSSLSSGTSVSSGVLLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLSDKHNSALRSSSLDLGVDPPSSRDPPFPASVPASNHLTNSLTTESIVSGVNKGSNRNGGLGLSDIISQIQASKNSSKLSYHSNASEPLSAFSSYSSKRSSERLQERNSVDDNGDFREARRFMNSHIDRQYLDTTYRDGNFRDSQNSYVPNFQRPLSRKNVTGRMSAGRRRSFDDSQLSLGEMSNYTDGPTSLHEALSEGLSSGSNWSARVAAFNYLHSLLQQGPKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIISACRKPFESYMERILPHVFSRLIDPKELVRQTCSATLEVVSKTYSIDSLLPAVLRSLDEQRSPKAKLAVIEFAISSFNKHSMNQEGAANTGILKSWLAKLTPLVHDKNTKLKEAAITCIISVYSHFDSAALLNFILSLSVEEQNSLRRALKQYTPRIEVDLMNYLQNKKERQRSKSSYDPSDVVGTSSEEGYVGFSRKANYLGKYSAGSLDSDGNMKWSSQDSTLVKASHYQAASGDNQELSYQNHDNDSTSGILGSKTKDLAYAVNSIGQNFVSHNSQLGHSDSSMNFEGLSTPHLDVNGLMSLEHLTLNVVEGFGHEKEHPLELDLNHHSTEAVKTNSLKDAEPGIPQILHLICKEGDGSPISGKRTALQQLIGTSTANDHSIWTKYFNQILTVVLEVLDDSDSTVRELALSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIVPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDERTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGTPIDAASHD 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0879 1495 SMART TOG_3 34 273 IPR034085 -
Dere02g0879 1495 SMART TOG_3 331 563 IPR034085 -
Dere02g0879 1495 SMART TOG_3 830 1072 IPR034085 -
Dere02g0879 1495 SMART TOG_3 1253 1486 IPR034085 -
Dere02g0879 1495 FunFam Protein peg1 315 562 - -
Dere02g0879 1495 SUPERFAMILY ARM repeat 50 451 IPR016024 -
Dere02g0879 1495 ProSiteProfiles HEAT repeat profile. 209 247 IPR021133 -
Dere02g0879 1495 PANTHER CLASP 81 1480 - -
Dere02g0879 1495 MobiDBLite consensus disorder prediction 738 759 - -
Dere02g0879 1495 Gene3D - 843 1067 IPR011989 -
Dere02g0879 1495 MobiDBLite consensus disorder prediction 291 314 - -
Dere02g0879 1495 ProSiteProfiles HEAT repeat profile. 132 170 IPR021133 -
Dere02g0879 1495 Gene3D - 44 270 IPR011989 -
Dere02g0879 1495 Gene3D - 1278 1485 IPR011989 -
Dere02g0879 1495 MobiDBLite consensus disorder prediction 660 685 - -
Dere02g0879 1495 SUPERFAMILY ARM repeat 337 1484 IPR016024 -
Dere02g0879 1495 Coils Coil 59 79 - -
Dere02g0879 1495 Coils Coil 1330 1350 - -
Dere02g0879 1495 Gene3D - 316 555 IPR011989 -
Dere02g0879 1495 Pfam CLASP N terminal 107 237 IPR024395 -
Dere02g0879 1495 Pfam CLASP N terminal 849 1043 IPR024395 -
Dere02g0879 1495 Pfam CLASP N terminal 334 549 IPR024395 -
Dere02g0879 1495 MobiDBLite consensus disorder prediction 291 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0879 Dere-ChrDere02 8368413 8381166 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3021 01 44695277 44712931 Dere02g0879 02 8368413 8381166 CCT
Dere02g0879 02 8368413 8381166 Dere02g0879 02 8368413 8381166 ECH