Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3021 ATGGTTATGTCAAAGTCTAGAGTCATCCTGGCCACTCTGGTGGTGGTACTGAGTGCAGTGGATCCAGAGAAAGCAGAGGCAGCTCGTGCTTTCTTCGTGTTTGGGGACTCACTGGTTGACAGTGGCAACAACAACTACTTGGTCACCACGGCACGTGCCGACTCTCCCCCCTACGGCATTGACTACCCCACCCATCGCCCCACTGGTCGTTTCTCCAATGGCTTCAACCTCGCCGACATCATCAGCCAGCAAATCGGGTCCGAACCCACATTGCCATACTTGAGCCCTGAGCTTAACGGACAAAAGCTCCTAGTTGGGGCCAACTTCGCTTCTGCCGGGATAGGAATTCTCAACGACACAGGCATCCAATTTGTAAGCACAATCTGCTACCTCTCCCTTCCCTGCTCTCTTGTTTGTCTCTATACAATGCATTTTCGGATTAATTCCCAAGAAGAGAAAAACTACAGATTTGTACATAGCCAAGAAAACCCACTTTTCTATTACCCTATTCCTCTCATCTCTTGTATTCAAATAGCCAGGAAATGCTGTGACTTTTATACTGTGCACGGTTTGTTGAAGAGGAATCATGCCGGAATCTGGTGTCGCACTTTCTGTGCGCTGAATTTGATAGGCAATTCCGGTAGCACTTTAACCAGATCTGAATCTGCTGGCTTCAGATCCAATCCCTTTATGAATTCGGCAATGGAGGAAGCACTGGAACTTGCTCGCACCAAAGACACCAAGGAGAGGATGGCCGGTGTTGAGCGCCTTCATCAACTTCTGGAAGCTTCCAGAAAGAGCCTCACTTCATCCGAGGTTTCTTCCCTCGTCGATTGTTGCTTGGATCTCTTAAAAGATAACAACTTCCGGGTCTCTCAAGGTGCACTTCAAGCTTTGGCCTCTGCTGCTGTGCTCTCCGGCGAGCATTTCAAACTTCACTTCAATGCTCTAGTTCCCGCCGTGGTCAACCGCTTAGGGGATGCCAAACAGCCAGTTCGTGACGCTGCCAGAAGACTCTTGCTCACTCTCATGGAGGTTTCTTCTCCCACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGTCACACAAAAGCTGGAGAGTCAGAGAGGAGTTTGCGCGTACTGTTACATCGGCAATTGGTCTATTTGCATCTACTGAGCTTACCCTTCAACGGGCTATTCTTCCTCCAATTTTGCAGTTGCTTAATGATCCAAACCCTGGTGTTAGGGAAGCAGCTATTTTGTGTATTGAGGAGATGTATGCTCAAGCTGGGCCTCAATTTCGTGATGAACTTCAGCGCCACAATCTTCCATTATCTTTGGTTAAAGATATTAATGCTAGGCTAGAGGGCATTCAACCAAAAGTTCGCTCCTCAGATGGTATTGCAAGTGGTTTTATTACCGGGGAAATAAAGCCTTTGAGCATTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGACATCTCTTTTTGGAGGAGAAGGTGATCTCACAGAGAAACCCATAGATCCTGTCAAGGTATACTCAGAAAAGGAGTTAATCAGGGAAATTGAAAAGATTGCATCTACCCTTGTACCAGAAAAGGACTGGTCAATTCGTATTTCTGCCATGCAAAGAGTTGAAGGTCTTGTTTTGGGAGGTGCTGCTGACTATCCAAGTTTTAGGGGACTCTTGAAGCAACTTGTTGGACCTTTAAGCACACAATTGTCTGATCGAAGATCTAGCATTGTGAAGCAGGCTTGCCATTTATTATGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAACCATGTGCCGAAATGTTCATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTACTTGTAATTGCAGAGTCTGCAGATAATTGCATTAAAACGATGCTGCGTAATTGTAAAGTTTCTCGTGTGCTTCCTCGTATAGCTGATTGTGCTAAAAATGATCGCAGTGCTGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGATTCTAGAAAATTGGCCTGATGCTCCAGAGATACAACGATCAGCTGATTTATATGAGGATTTGATAAGGTGTTGTGTTTCAGATGCAATTAGTGAGGTACGGTCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAGACTTGGCCAGAGCGTTCACGCCGCCTATTTTCATCCTTTGACCCAGTTATCCAAAGGTTGATAAATGAAGAGGATGGAGGAATACACAAGCGACATGCTTCACCTTCCATTCGTGATAGAGGTGCACTGCAGTCATTAAATAGTCAAGCATCTGCTCCCTCAAATCTACCTGGATATGGAACTTCTGCTATTGTTGCAATGGACAGAAGTTCAAGTATATCATCAGGGGCATCTGTCTCCTCTGGTGTTCTCATTTCTCAAGCAAAGTCACTTGGTAAAGGCACAGAGCGTAGTTTAGAAAGTGTGTTGCATGCTAGCAAACAGAAGGTCACCGCAATTGAAAGTATGCTTAGAGGTTTAGATTTGTCTGATAAGCATAATTCATCTGCTCTCTGCTCATCAAGTCTGGATCTAGGAGTTGACCCTCCTTCATCTCGTGATCCACCATTCCCTGCTGCTGTCCCAGCATCTAATCACTTGACAAACTCTTTAACTATAGAATCAGCTGCTTCTGGTGTCAATAAAGGTACTAATCGAAATGGTGGTTTGGGTTTGTCTGATATAATCACTCAAATCCAAGCTTCCAAAATTTCTGGTAGGTTATCATATCATAGTAATGTTGCTACAGAGCCGATATCAGCACTTTCATCATACTCGAGTAAAAGGGCTTCTGAAAGACTTCAGGAAAGAAGTTCTGTTGATGATAACAGTGACATTAGAGAGGCTAGGCGGTTTGTGAATCCCCACATTGATCGGTATATGGATATACCTTATAGAGATGGAAACTGTAGGGATTCCCAAAATAGTCATGTGCCTAATTTCCAGAGGCCATTATTGAGGAAAAATGTAGCTGGTCGTATGTCTGTTGGAAGGAGGAGGAGTTTTGATGATAGTCAGCTACCTCTTGGAGAGTCATCCAATTATACAGATGGACCGGCATCTCTTCATGAAGCTCTGAACGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCTAGGGTTGCGGCTTTTAATTATCTTCGCTCTTTGTTACAGCAAGGTCCAAAGGGAATTCAAGAAGTAGTCCAGAATTTTGAGAAGGTAATGAAGCTCTTTTTTCAGCACTTGGATGATCCCCACCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCTGATATTATTCCAGCATGCCGAAAGCCCTTTGAGAGTTACATGGAAAGAATATTACCCCATGTATTTTCTCGGTTAATTGACCCCAAAGAGCTTGTTAGGCAACCAAGTTCAACGACTTTGGAAATTGTTAGCAAAACTTACAGTGTAGATTCTCTCTTACCTGCATTGCTCCGCTCACTAGATGAACAAAGGTCTCCAAAAGCAAAGTTGGCTGTTATTGAATATGCAATCAGCTCCTTTAACAAGCATGCGATGAATCCAGAAGGTGCTGCCAATACTGGCATCCTGAAATTATGGCTTGCCAAGTTAGCACCATTGGTTCATGACAAAAATACAAAACTCAAAGAAGCAGCAATTACATGCATTATATCAGTGTATTCTCACTTTGATTCCACTGCAGTTTTGAATTTCATTCTTAGTTTGTCAGTTGAAGAGCAGAATGTGCTGAGGCGAGCGCTTAAACAGTACACTCCTCGCATTGAAGTAGACCTAATGAACTATTTACAGAACAAGAAAGAGAGACATCGTTCTAAGTCTTCCTATGATCCATCTGATGTTGTTGGAACATCCTCGGAAGAGGGGTATGCTGGGGTTTCTAGGAAAGCTCATTACCTTGGAAGGTATTCTGCTGGTTCCCTTGATGGTGATGGTGGTAGGAAGTGGAGTTCCCAAGATTCAACCCTTATTAAAGCCAGTCTTGGCCAAGCAGCTTCTGTTGAAACTCAGGAACATTTTCATCAGAATTTTGAGACTGATTCTAATAGTGGTACTATTGATTCAAAAACCAAGGATCCTGGTTCCACTGTCAATCCAATGGGCCAAAATTCTGGCTCTCAAACTGGTCAACTCGGGCATGTAGACAGTAGCATTAACTTTGAGGGTCTTTCAACTCCTCGTCTAGATGTTAATGGTCTGATTTCCGTAGAACGTTTAAATGTTACTGAAAGCTTTGGAAATGAAAGAGAACATCCTTCTGAGTTGGACCTCAATCATCACTTAGCTGAAGCTGTGAAGATTAACTCCTTGACAGACACAGGTCCCAGCATTCCTCAAATTCTTCATCTGATATGCAGTGGGGGTGATGGAAACTCTGTTTCAAGTAAGAGGACTGCACTTCAACAGTTGGTTGAAGCTTCTAAAGCAAATGATCATTCCATATGGACAAAGTACTTCAATCAGATTTTGACAGCAGTGCTTGAGTTGTTGGATGATTCAGAGTCCTCTATCAGAGAGCTGACACTTTCATTAATTGTTGAAATGCTAAAAAACCAGAAGGATGCCATGGAAGATTCAGTTGAAATTGTAATTGAGAAGTTGCTTCATGTTACAAAGGATATCGATCCTAAGGTCTCAAATGCAGCAGAGCACTGCCTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTTTGAGTGTTATTGTTCCCTTACTGGTTACGGAGGATGAGAAAACTCTTGTTACTTGTATAAATTGCTTGACAAAGCTTGTGGGCCGACTCTCACAGGAAGAACTGATGGCTCGTTTACCTTCATTCTTGCCTGCGCTTTTTGAAGCTTTTGGGAACCAAAGTGCCGATGTTCGCAAGACTGTTGTTTTCTGTCTAGTGGATATTTACATCATGCTCGGGAAAGCATTCTTGCCGTACTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCACAGGCCAGGACAGGCGTGGCAATTGATGCCACCCAGGACTAG 5040 0.4345 MVMSKSRVILATLVVVLSAVDPEKAEAARAFFVFGDSLVDSGNNNYLVTTARADSPPYGIDYPTHRPTGRFSNGFNLADIISQQIGSEPTLPYLSPELNGQKLLVGANFASAGIGILNDTGIQFVSTICYLSLPCSLVCLYTMHFRINSQEEKNYRFVHSQENPLFYYPIPLISCIQIARKCCDFYTVHGLLKRNHAGIWCRTFCALNLIGNSGSTLTRSESAGFRSNPFMNSAMEEALELARTKDTKERMAGVERLHQLLEASRKSLTSSEVSSLVDCCLDLLKDNNFRVSQGALQALASAAVLSGEHFKLHFNALVPAVVNRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWSHKSWRVREEFARTVTSAIGLFASTELTLQRAILPPILQLLNDPNPGVREAAILCIEEMYAQAGPQFRDELQRHNLPLSLVKDINARLEGIQPKVRSSDGIASGFITGEIKPLSINPKKSSPKAKSSSRETSLFGGEGDLTEKPIDPVKVYSEKELIREIEKIASTLVPEKDWSIRISAMQRVEGLVLGGAADYPSFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEPCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVSRVLPRIADCAKNDRSAVLRARCCEYALLILENWPDAPEIQRSADLYEDLIRCCVSDAISEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHKRHASPSIRDRGALQSLNSQASAPSNLPGYGTSAIVAMDRSSSISSGASVSSGVLISQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLSDKHNSSALCSSSLDLGVDPPSSRDPPFPAAVPASNHLTNSLTIESAASGVNKGTNRNGGLGLSDIITQIQASKISGRLSYHSNVATEPISALSSYSSKRASERLQERSSVDDNSDIREARRFVNPHIDRYMDIPYRDGNCRDSQNSHVPNFQRPLLRKNVAGRMSVGRRRSFDDSQLPLGESSNYTDGPASLHEALNEGLSSGSDWSARVAAFNYLRSLLQQGPKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIPACRKPFESYMERILPHVFSRLIDPKELVRQPSSTTLEIVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEYAISSFNKHAMNPEGAANTGILKLWLAKLAPLVHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNVLRRALKQYTPRIEVDLMNYLQNKKERHRSKSSYDPSDVVGTSSEEGYAGVSRKAHYLGRYSAGSLDGDGGRKWSSQDSTLIKASLGQAASVETQEHFHQNFETDSNSGTIDSKTKDPGSTVNPMGQNSGSQTGQLGHVDSSINFEGLSTPRLDVNGLISVERLNVTESFGNEREHPSELDLNHHLAEAVKINSLTDTGPSIPQILHLICSGGDGNSVSSKRTALQQLVEASKANDHSIWTKYFNQILTAVLELLDDSESSIRELTLSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIDPKVSNAAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMARLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGVAIDATQD 1679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3021 1679 ProSiteProfiles HEAT repeat profile. 317 355 IPR021133 -
Dere01g3021 1679 Pfam GDSL-like Lipase/Acylhydrolase 32 118 IPR001087 GO:0016788
Dere01g3021 1679 Pfam CLASP N terminal 1036 1230 IPR024395 -
Dere01g3021 1679 Pfam CLASP N terminal 518 734 IPR024395 -
Dere01g3021 1679 SUPERFAMILY ARM repeat 197 945 IPR016024 -
Dere01g3021 1679 Gene3D - 1028 1254 IPR011989 -
Dere01g3021 1679 ProSiteProfiles HEAT repeat profile. 394 432 IPR021133 -
Dere01g3021 1679 PANTHER CLASP 266 1665 - -
Dere01g3021 1679 Gene3D SGNH hydrolase 20 133 IPR036514 -
Dere01g3021 1679 SMART TOG_3 216 458 IPR034085 -
Dere01g3021 1679 SMART TOG_3 1435 1671 IPR034085 -
Dere01g3021 1679 SMART TOG_3 1014 1259 IPR034085 -
Dere01g3021 1679 SMART TOG_3 504 747 IPR034085 -
Dere01g3021 1679 Gene3D - 1459 1669 IPR011989 -
Dere01g3021 1679 Gene3D - 231 455 IPR011989 -
Dere01g3021 1679 SUPERFAMILY ARM repeat 524 1669 IPR016024 -
Dere01g3021 1679 MobiDBLite consensus disorder prediction 480 495 - -
Dere01g3021 1679 Pfam HEAT repeat 394 421 IPR000357 GO:0005515
Dere01g3021 1679 Coils Coil 1515 1535 - -
Dere01g3021 1679 MobiDBLite consensus disorder prediction 474 501 - -
Dere01g3021 1679 Gene3D - 501 741 IPR011989 -
Dere01g3021 1679 MobiDBLite consensus disorder prediction 1269 1290 - -
Dere01g3021 1679 MobiDBLite consensus disorder prediction 1003 1022 - -
Dere01g3021 1679 MobiDBLite consensus disorder prediction 1345 1386 - -
Dere01g3021 1679 FunFam Protein peg1 500 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3021 Dere-ChrDere01 44695277 44712931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3021 30 121 Acyl Lipid Metabolism Gene Families AT4G10950 48.913 3.70e-18 87.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3021 01 44695277 44712931 Dere02g0879 02 8368413 8381166 CCT
Dere01g3021 01 44695277 44712931 Dere01g3021 01 44695277 44712931 ECH